iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109617

Ensembl Protein ID

EFJ37833

UniProt Accession

D8QQP6; D8QQP6_SELML

Genbank Protein ID

EFJ37833.1

Protein Name

Putative uncharacterized protein TPLb-1

Genbank Nucleotide ID

GL377565

Gene Name

TPLb-1; SELMODRAFT_163891

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_163891	EFJ37833	EFJ37833

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-21	75.3	462	498
UBD/Beta-Prp	6.00e-58	197.1	420	681

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H +sv++laf  ++  l ++s++dD+tikvWD  +g+
   Q: 462  HVGSVNDLAFahPNkQLcIISCGDDKTIKVWDAVSGR 498
           99*********97653359*************88887 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..s 105
            +t v +spd++++ +++  + ++v++++ g       ++  h + v+++ f +  k   ++++++D+tikvwd  +g   +t++ghe+ v+s+  +   +
   Q: 420  AVTRVVWSPDGNFIGVAFNKHIVQVYQYFGGVElrqQVEIDAHVGSVNDLAFAHPNKqlCIISCGDDKTIKVWDAVSGRNKYTFEGHEAPVYSVCPHHkeN 520
           567788899***99999999999******999944444568999999999999887779999*****************************9987777656 PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
            +++ s+  d  i+ w  +      + ++   ++ ++++++ dg  l+s+++    D+++  W+ + g + rt  g  +++ + ++fd ++++++++++  
   Q: 521  IQFIFSTAMDGKIKAWLYDCLGSRVDYDA-PGSWCTTMAYSADGTRLFSCGTskegDSFLVEWNESEGVIKRTYIGFRKRMPNVVQFDTTRNCFLAVGDEF 620
           69999*********995554444333444.45599999999999888888764555788888888999999999998999999999***99********** PP
   S: 203  tvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktl 260
           +vk+wd+ + + + +  +    + s  +rf +++ +l++++ D+  +i  + +   ll+++
   Q: 621  SVKFWDMDNINLLTSIDADGGLPASprIRFNKEGSLLAVTTIDNGFKILaNADGLRLLRSF 681
           ******9998888888777766554226666777777777777777764455555555555 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDQVQNGEW DEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKQDR ARAVEILVKD LKVFASFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCAC TCAGCCGGGA GCTCGTGTTC CTCATCTTGC AGTTCCTGGA TGAGGAGAAA 60
TTCAAGGAGA CGGTGCACAA GTGAGAAGAT TTGTGGTTTG TTCTTGTTGG TGGATGTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

smo:SELMODRAFT_163891

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002737	Amborella trichopoda	71.66	0.00e+00	1561.00
IUUC-Aly-005472	Arabidopsis lyrata	69.47	0.00e+00	1498.00
IUUC-Ath-007640	Arabidopsis thaliana	68.58	0.00e+00	1508.00
IUUC-Bol-015359	Brassica oleracea	69.19	0.00e+00	1496.00
IUUC-Bra-016893	Brassica rapa	68.54	0.00e+00	1496.00
IUUC-Gma-044036	Glycine max	69.43	0.00e+00	1552.00
IUUC-Mtr-058562	Medicago truncatula	70.11	0.00e+00	1539.00
IUUC-Mac-065382	Musa acuminata	68.42	0.00e+00	1537.00
IUUC-Ppe-101370	Prunus persica	69.90	0.00e+00	1572.00
IUUC-Sly-111739	Solanum lycopersicum	69.33	0.00e+00	1531.00
IUUC-Stu-112409	Solanum tuberosum	65.27	0.00e+00	1446.00
IUUC-Tca-121628	Theobroma cacao	70.32	0.00e+00	1550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence