iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131077

Ensembl Protein ID

VIT_11s0016g05620.t01

UniProt Accession

F6HHA4; F6HHA4_VITVI

Genbank Protein ID

CCB51600.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595756

Gene Name

VIT_11s0016g05620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_11s0016g05620	VIT_11s0016g05620.t01	VIT_11s0016g05620.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-20	70.6	461	495
UBD/Beta-Prp	1.70e-53	182.3	419	694

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H +sv++laf  ++   +v+++ D  ikvWD  tg
   Q: 461  HVGSVNDLAFsyPNkLCVVTCGEDRFIKVWDANTG 495
           99********99874558*************8776 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghed 95
            ++ v +spd++l+ +++  + + ++++++g+      +++ h + v+++ fs   k   vt++eDr+ikvwd +tg+  +t++ghe+
   Q: 419  SVNRVMWSPDGTLFGVAYSKHIVHLYSYHNGDDlrnHLEIEAHVGSVNDLAFSYPNKlCVVTCGEDRFIKVWDANTGSKQYTFEGHEA 506
           5667889************************99444445699***********88776999*************************** PP
   S: 96   svlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltg 177
            v+s+  +   + +++ s+  d  i+ w  ++     + +++ +++++ ++++ dg  l+s+++    D+ +  W+ + g + rt  g
   Q: 507  PVYSVCPHHkeNIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHSSTT-MAYSADGTRLFSCGTnkegDSYIVEWNESEGAVKRTYHG 593
           ****887776666***************98887777766665444433.3444445777777652444677888999*********99 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
             ++sv  ++fd ++++++++++   vk+wd+ + + ++t  +    +   ++rf +++ +l++ + ++ i+i  + +   ll+t+++
   Q: 594  LGKRSVGVVQFDTTKNRFLAAGDEFLVKFWDMDNVNLLMTTDAEGGLPAspCIRFNKEGILLAVSTNENGIKILaNQEGIRLLRTMEN 681
           99*******************************9999999999886654237999988888888889999999655555556666666 PP
   S: 263  hn...ssvisvav 272
           +    s+v s av
   Q: 682  RSfdaSRVASAAV 694
           5566566666665 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMRY FEETVTNGEW DDVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKRDR AKAVEILVKD LKVFSAFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAGGAGAG AGAGAAACCA GGGAGAGGGT GCAGTAGGAA CGATCGCACC TTGTCGTTGT 60
CTCCGCCTCT ACTCTGCTTT GAGTCGTCCC GATCCGTTTT GAGTTTTCTC TTTCAATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002737	Amborella trichopoda	80.88	0.00e+00	1803.00
IUUC-Gma-043977	Glycine max	86.96	0.00e+00	1933.00
IUUC-Mtr-058586	Medicago truncatula	86.08	0.00e+00	1948.00
IUUC-Pop-099438	Populus trichocarpa	85.61	0.00e+00	1900.00
IUUC-Ppe-101506	Prunus persica	87.73	0.00e+00	1979.00
IUUC-Stu-112409	Solanum tuberosum	79.81	0.00e+00	1806.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence