iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017430

Ensembl Protein ID

Bra010349.1-P

UniProt Accession

M4D1J9; M4D1J9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010349	Bra010349.1	Bra010349.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.1	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+    +++lp C H+fh  C+ +w        ++++CPlCr
   Q: 128  CSVCLSKFESVeiLRLLPkCRHAFHIGCIDQW------LEQHATCPLCR 170
           ********6623355666**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MYQIFFFFFF VTTFHSYYYV SAQPPAPPLS NGDLVANFEP SLAIVTGVLA IMFALTFVVL 60
VYAKCCHMDL LSGSGDGRRQ DRLTRQGFFF NRSTNSSARF SGLDKTAIES LPMFRFSALK 120

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Nucleotide Sequence
(Fasta)

ATGTATCAAA TCTTCTTCTT CTTCTTCTTT GTTACAACCT TCCACAGTTA TTACTATGTC 60
TCAGCTCAGC CTCCTGCTCC TCCGCTCAGT AACGGCGACC TGGTCGCCAA TTTCGAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	36.25	1.00e-66	246.00
IUUC-Bol-015696	Brassica oleracea	94.77	0.00e+00	637.00
IUUC-Mtr-057998	Medicago truncatula	44.89	1.00e-79	290.00
IUUC-Opu-084088	Oryza punctata	33.77	4.00e-50	191.00
IUUC-Ppe-101585	Prunus persica	46.32	2.00e-82	299.00
IUUC-Sly-111270	Solanum lycopersicum	45.80	4.00e-85	307.00
IUUC-Sbi-114371	Sorghum bicolor	32.18	2.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence