iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111182

Ensembl Protein ID

Solyc04g079780.2.1

UniProt Accession

K4BV57; K4BV57_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g079780.2	Solyc04g079780.2.1	Solyc04g079780.2.1

Status

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	2.20e-41	142.5	121	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikel..lveeelykryekllleevveadaal 88
           C++C+  ++  e t+l+eC+h+fC++C+++y+ +ki++g+  +++c+a++c++ ++e +i+ l    +++l ++++++ le+++e ++ +
   Q: 121  CEICFEDFPD-EQTTLMECNHRFCNDCWTEYFVVKINDGKSRRVTCMAQKCKAICDEGKIRDLvtAKDPNLAEKFDRFILESYIEDNKRV 209
           *****99987.556699*********************************************944456789******************* PP
   S: 89   kwcpa.pdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegC 177
           kwcp  p+C  ++++e++ e  evec +cg++fC++C  e H+++sC ++  +l+k++   +ea + ++l++++k+CpkC+  +ek++gC
   Q: 210  KWCPSvPHCGNAIRVEDD-EYCEVEC-ACGQQFCFNCLCELHSPCSCVMWDLWLKKCD---DEAPTVNWLSEKTKHCPKCHKIVEKDGGC 294
           ***9548**********6.999****.9******************************...99*************************** PP
   S: 178  nhmtCakCkaefCwlC 193
           n ++C  C++ fCwlC
   Q: 295  NLVQC-ICGQPFCWLC 309
           *****.9********* PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDDIYGSDED YYNGEYEDDY DRDPEPESDD DLSCGKAPSC RVIKKESLLA AQKEDLQRVV 60
DLLSLKEHHA RTLLIHYQWD VDKVFAIFVE RGKERLFVEA GITLEEKNEN PSSDPSTEYT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGGGTTA CTTGCTTTCC CCTCCAAAAA AATCAATATT GGTGACGAAT TAAAAAAAGA 60
GAATGTGCAG AATCCCATTC TAATTTTTTT TTTCTAAGTT TCCATTTTTG TGCAACTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4

SMART

SM00647--IBR

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101245941

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002480	Amborella trichopoda	58.73	2.00e-179	621.00
IUUC-Aly-005807	Arabidopsis lyrata	58.75	0.00e+00	637.00
IUUC-Ath-007166	Arabidopsis thaliana	61.71	0.00e+00	636.00
IUUC-Bdi-014685	Brachypodium distachyon	58.97	3.00e-176	611.00
IUUC-Bol-016507	Brassica oleracea	56.83	1.00e-169	589.00
IUUC-Bra-018038	Brassica rapa	59.24	4.00e-175	607.00
IUUC-Cel-018521	Caenorhabditis elegans	30.51	1.00e-52	199.00
IUUC-Eeu-034838	Erinaceus europaeus	26.00	6.00e-36	144.00
IUUC-Gma-043188	Glycine max	57.74	2.00e-178	618.00
IUUC-Lpe-051110	Leersia perrieri	59.18	6.00e-179	619.00
IUUC-Mla-058889	Melampsora laricipopulina	28.33	6.00e-47	181.00
IUUC-Mac-064550	Musa acuminata	61.32	0.00e+00	644.00
IUUC-Oba-075628	Oryza barthii	55.07	7.00e-157	546.00
IUUC-Obr-076492	Oryza brachyantha	59.18	3.00e-179	620.00
IUUC-Ogl-077447	Oryza glaberrima	59.18	7.00e-179	619.00
IUUC-Ogu-078881	Oryza glumaepatula	59.18	9.00e-179	619.00
IUUC-Oin-079573	Oryza indica	58.23	2.00e-173	601.00
IUUC-Olo-080774	Oryza longistaminata	59.21	1.00e-178	619.00
IUUC-Ome-081275	Oryza meridionalis	55.05	4.00e-157	547.00
IUUC-Oni-082267	Oryza nivara	55.05	4.00e-157	547.00
IUUC-Opu-084135	Oryza punctata	59.18	6.00e-179	619.00
IUUC-Oru-084849	Oryza rufipogon	59.18	5.00e-179	620.00
IUUC-Osa-085435	Oryza sativa	59.38	1.00e-179	622.00
IUUC-Ppe-101740	Prunus persica	62.17	0.00e+00	631.00
IUUC-Sit-110348	Setaria italica	60.41	2.00e-180	624.00
IUUC-Stu-112217	Solanum tuberosum	96.36	0.00e+00	991.00
IUUC-Sbi-114262	Sorghum bicolor	59.59	7.00e-180	623.00
IUUC-Tca-121037	Theobroma cacao	61.43	0.00e+00	635.00
IUUC-Tae-124132	Triticum aestivum	59.59	2.00e-178	618.00
IUUC-Tur-126320	Triticum urartu	56.25	6.00e-158	550.00
IUUC-Vvi-131463	Vitis vinifera	61.57	0.00e+00	653.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence