iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131118

UUCD1 version

UUC-ViV-00790

Ensembl Protein ID

VIT_03s0063g01790.t01

UniProt Accession

F6HQI2; F6HQI2_VITVI

Genbank Protein ID

CCB56939.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596006

Gene Name

VIT_03s0063g01790

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0063g01790	VIT_03s0063g01790.t01	VIT_03s0063g01790.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-34	115.3	206	243
UBD/Beta-Prp	6.40e-49	167.3	104	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+cl++ +d +ll sGs+D+t+kvW++++ ++l 
   Q: 206  HFDAVSCLSLdQDqGLLYSGSWDKTLKVWRISDSKCLE 243
           8899*******889*****************9999986 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...................... 82
           +    ++ll tgs+++ i+vw++ +  + + ++++++ v+a+ +s +   + tg++D+ i+vw +s                      
   Q: 104  AA--TGNLLYTGSDSKNIRVWKNLK--AYSGFKSNSGLVKAIVISGE--KIFTGHQDGKIRVWRVSpknpklhkrigslptfkdflks 185
           44..89*****************99..789*****************..69************77777889***************** PP
   S: 83   ...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
                          v  + +h d v +ls+++++  l sGs+d+t++vw ++  +cle   + hd+++n vv  +++ l+++Gs+D+
   Q: 186  sinpknyvkvrRKRSVLRI-KHFDAVSCLSLDQDQGLLYSGSWDKTLKVWRISDSKCLE-SIRAHDDAINAVV-AGFAGLVFTGSADG 270
           **88888887544445555.5**************************************.9999999999876.5679********** PP
   S: 160  tvrlWdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrf 230
           tv++W             l+tl   ++ +++sl+++ +g  +  gs dg v++w+ + + +    l+gh+  v+++++
   Q: 271  TVKVWHRqlhgkgTKHLFLQTLLN-QETAITSLAVNTEGAIIYCGSSDGLVNFWEREkHLKHGGVLRGHKHAVLCLAT 347
           *******99998777777888886.******************************9965555789999**99999875 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MRNERGGVVL AERNVLPRPK LSAILRSDPK NDEEEMNRRS NVSMDSSVPP SSGENSPLVM 60
SPWNHPSSPF AKSPWTKSSS PMGLPQNGLI GSMVREEGHV YSLAATGNLL YTGSDSKNIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATTTGATG ATCACCTTCA TGTCCCTGAA TTAAATTTTA TTTTTCACTT AGGATTCAGA 60
ATTTTCAGTG TCAAATGAGG AATGAGAGAG GAGGCGTGGT GTTGGCGGAG AGGAATGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vvi:100248616

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	65.65	7.00e-174	602.00
IUUC-Bol-015603	Brassica oleracea	67.30	6.00e-136	476.00
IUUC-Lpe-051623	Leersia perrieri	63.43	5.00e-134	469.00
IUUC-Mac-065108	Musa acuminata	54.43	9.00e-108	382.00
IUUC-Ogu-078924	Oryza glumaepatula	64.48	4.00e-141	493.00
IUUC-Ppa-095309	Physcomitrella patens	47.99	1.00e-78	286.00
IUUC-Pop-099551	Populus trichocarpa	68.65	9.00e-175	605.00
IUUC-Ppe-101355	Prunus persica	65.00	5.00e-168	583.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence