iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111041

Ensembl Protein ID

Solyc04g077610.2.1

UniProt Accession

K4BUJ8; K4BUJ8_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g077610.2	Solyc04g077610.2.1	Solyc04g077610.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-29	100.9	64	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +vp+ f+CpIsle+M+dPv+l++G+ty+rs+I kw++ g+ tcP+t+q+l +++++Pn tl++li +w +++
   Q: 64   DVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSITPNSTLHQLIYSWFSQK 135
           69******************************************************************9987 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MPMYVPSRGR VEEFDVGGGG QVLDLETAVK DGILGGGGGV VVHGGAIEKK LSLRKMMEEL 60
DSIDVPSVFI CPISLEPMQD PVTLCTGQTY ERSNILKWFS LGHFTCPTTM QELWDDSITP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCACACGC TTCATTTTTG CCCTCTAAAT GTGATGTTCT TGTTGCTTTG AAGCATACCC 60
CTTCTTGTTC TAAAGGGGAA GATATTCTTT CTTAGTTTTT TAACATTTGA CTAAAAGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	52.67	1.00e-125	442.00
IUUC-Atr-002608	Amborella trichopoda	61.63	6.00e-136	476.00
IUUC-Aly-005542	Arabidopsis lyrata	60.22	2.00e-134	471.00
IUUC-Ath-007399	Arabidopsis thaliana	60.44	5.00e-137	479.00
IUUC-Bdi-014966	Brachypodium distachyon	53.78	1.00e-129	455.00
IUUC-Bol-015410	Brassica oleracea	59.78	5.00e-132	463.00
IUUC-Bra-017594	Brassica rapa	61.42	9.00e-130	456.00
IUUC-Gma-044207	Glycine max	62.89	1.00e-152	532.00
IUUC-Hvu-047172	Hordeum vulgare	53.44	4.00e-123	434.00
IUUC-Lpe-050937	Leersia perrieri	52.76	1.00e-113	402.00
IUUC-Mtr-058060	Medicago truncatula	62.31	3.00e-152	530.00
IUUC-Mac-065362	Musa acuminata	59.34	4.00e-133	467.00
IUUC-Oba-075363	Oryza barthii	48.22	1.00e-86	312.00
IUUC-Obr-076221	Oryza brachyantha	52.44	5.00e-121	426.00
IUUC-Ogl-077601	Oryza glaberrima	53.11	8.00e-108	383.00
IUUC-Ogu-078802	Oryza glumaepatula	52.89	6.00e-117	413.00
IUUC-Oin-079670	Oryza indica	52.89	2.00e-107	382.00
IUUC-Olo-080252	Oryza longistaminata	51.65	6.00e-61	226.00
IUUC-Ome-081565	Oryza meridionalis	52.89	2.00e-107	382.00
IUUC-Oni-082638	Oryza nivara	52.89	2.00e-107	382.00
IUUC-Opu-083387	Oryza punctata	53.11	2.00e-107	382.00
IUUC-Oru-084585	Oryza rufipogon	52.89	2.00e-107	382.00
IUUC-Osa-086056	Oryza sativa	52.89	2.00e-107	382.00
IUUC-Pop-098956	Populus trichocarpa	65.92	1.00e-156	545.00
IUUC-Ppe-101369	Prunus persica	72.81	3.00e-171	593.00
IUUC-Sit-109761	Setaria italica	54.00	3.00e-126	444.00
IUUC-Stu-112727	Solanum tuberosum	91.54	0.00e+00	780.00
IUUC-Sbi-113971	Sorghum bicolor	54.44	5.00e-133	466.00
IUUC-Tca-121164	Theobroma cacao	69.49	1.00e-157	548.00
IUUC-Tae-125028	Triticum aestivum	52.67	1.00e-125	442.00
IUUC-Tur-126157	Triticum urartu	48.37	1.00e-39	156.00
IUUC-Vvi-131644	Vitis vinifera	72.82	4.00e-160	556.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence