iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016941

Ensembl Protein ID

Bra003052.1-P

UniProt Accession

M4CFS0; M4CFS0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003052	Bra003052.1	Bra003052.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-28	98.0	308	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gH+++v ++++  d+ l+s+s D+t+++W l ++v+
   Q: 308  GHAGEVLDISWsKDNSLLSASMDKTVRLWKLGSNVC 343
           8**********8779***************988877 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDYLSQEEDL HFFDANEEEM MNPSAFGFHV WNDSPGSVVE RRRRFLEWMG VEGDLKNMDV 60
ESQEICIEAE QGYSSFSSQV SSSGSGSSVV EVVSEELSLM RVDKNVGGCD VTRRESSSTA 120

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Nucleotide Sequence
(Fasta)

ATGGATTACT TGTCTCAAGA GGAAGATTTG CACTTCTTTG ATGCCAACGA GGAAGAGATG 60
ATGAATCCAA GTGCTTTTGG TTTCCATGTT TGGAATGATT CACCTGGAAG CGTTGTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002755	Amborella trichopoda	51.81	4.00e-136	478.00
IUUC-Aly-006365	Arabidopsis lyrata	77.56	0.00e+00	977.00
IUUC-Ath-006851	Arabidopsis thaliana	77.86	0.00e+00	992.00
IUUC-Bol-016589	Brassica oleracea	94.55	0.00e+00	1185.00
IUUC-Hvu-047828	Hordeum vulgare	46.14	6.00e-132	464.00
IUUC-Mtr-057948	Medicago truncatula	54.01	2.00e-153	536.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence