iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098865

Ensembl Protein ID

POPTR_0001s08840.1

UniProt Accession

B9GKN0; B9GKN0_POPTR

Genbank Protein ID

EEE84365.2

Protein Name

UBX domain-containing family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_1067013; POPTR_0001s08840g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s08840	POPTR_0001s08840.1	POPTR_0001s08840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	8.20e-11	43.4	511	583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvps 74
           +++++tl +R+pdG+r  r+F +s++l++ ++f++  +v +  ++ Lv+p+Prr +++ e+  tl+e+gL+++
   Q: 511  DENAVTLLVRMPDGSRRGRRFLKSDNLQAFFDFIDIGRVVKPGTYRLVRPYPRRAFSDGESALTLNELGLASK 583
           56699******************************9999999****************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MARPNQEAID TFISITGVAE DAAVLKLEEH GGDLNAAVNA HFSEGDRSAI RRPSIHAPQD 60
DLMDIDGDPI EVAPPPRRNP QPLLSESVAM NRFPLLDPRF QRGVLGTGSD FTNQAPFVSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAAAGG AAACTAGGTA CTGGGTAGAG ACCAGACCAG AGTAAACTCA ACCAGAAGCA 60
TAGAATAAAA AATAAAAACA CCAAACCCCT CCTTCTTTCC TCACCAAGCA AACAATCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

KEGG

pop:POPTR_0001s08840g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001073	Aegilops tauschii	45.26	1.00e-93	337.00
IUUC-Atr-002702	Amborella trichopoda	48.70	1.00e-95	343.00
IUUC-Aly-006024	Arabidopsis lyrata	54.03	8.00e-124	436.00
IUUC-Bdi-014955	Brachypodium distachyon	49.08	4.00e-102	364.00
IUUC-Gma-043678	Glycine max	59.52	1.00e-145	509.00
IUUC-Hvu-047478	Hordeum vulgare	45.18	5.00e-83	301.00
IUUC-Lpe-051095	Leersia perrieri	49.59	3.00e-111	394.00
IUUC-Mtr-058440	Medicago truncatula	54.84	2.00e-125	442.00
IUUC-Mmu-063233	Mus musculus	35.23	4.00e-08	51.20
IUUC-Mac-065477	Musa acuminata	52.43	4.00e-117	414.00
IUUC-Oba-075728	Oryza barthii	48.70	2.00e-103	369.00
IUUC-Obr-076827	Oryza brachyantha	50.58	8.00e-100	357.00
IUUC-Ogl-077428	Oryza glaberrima	48.35	4.00e-104	371.00
IUUC-Ogu-078920	Oryza glumaepatula	50.25	4.00e-106	377.00
IUUC-Oin-079876	Oryza indica	50.25	6.00e-106	377.00
IUUC-Olo-080464	Oryza longistaminata	46.34	5.00e-91	328.00
IUUC-Ome-081904	Oryza meridionalis	47.69	3.00e-100	358.00
IUUC-Oni-082433	Oryza nivara	48.70	2.00e-103	369.00
IUUC-Opu-083184	Oryza punctata	50.50	2.00e-113	402.00
IUUC-Oru-084236	Oryza rufipogon	50.25	1.00e-105	376.00
IUUC-Osa-085356	Oryza sativa	48.51	1.00e-105	376.00
IUUC-Ppe-101824	Prunus persica	61.76	1.00e-135	475.00
IUUC-Rno-105965	Rattus norvegicus	36.25	1.00e-06	46.60
IUUC-Smo-109261	Selaginella moellendorffii	44.39	1.00e-53	202.00
IUUC-Sly-111038	Solanum lycopersicum	56.43	8.00e-145	506.00
IUUC-Stu-112767	Solanum tuberosum	54.74	3.00e-135	474.00
IUUC-Sbi-114655	Sorghum bicolor	49.51	3.00e-103	369.00
IUUC-Tca-121591	Theobroma cacao	65.15	7.00e-164	570.00
IUUC-Tae-125273	Triticum aestivum	50.00	2.00e-108	385.00
IUUC-Tur-126134	Triticum urartu	49.24	2.00e-101	363.00
IUUC-Vvi-130858	Vitis vinifera	61.44	2.00e-157	548.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence