iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d002624	Zm00001d002624_T006	Zm00001d002624_T006
Zm00001d002624	Zm00001d002624_T003	Zm00001d002624_T003
Zm00001d002624	Zm00001d002624_T001	Zm00001d002624_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-06	28.1	203	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+  +   ++ +  lpCgH++h+ C+ kw       + +  CP+C+
   Q: 203  CVICCMAYknrDR-LTKLPCGHHYHQACVAKW------LQINKVCPVCN 244
           9***888866444.777***************......**********7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MYLLGNKSGK KKVYVDYMNV PLPYAIEENY GGRFFDDDDD LAQVLQDQEI LYHLIQGSNG 60
GGSSRTHSIP SSSYGHDRTS NAQKLSGDVN CECELQLAVD EALARELHEM ESKLANTSLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTCCACA AGACCACAAC ACCGTGATTA CACGATGCCA CTGGTGGCGA GCCGGCCATT 60
TCAGCCAAAG CGGTGGGCCG CGCTTCCTTC CTCAGTCCTC ACTACTCACT CGTCCCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001097	Aegilops tauschii	67.33	2.00e-81	294.00
IUUC-Atr-002961	Amborella trichopoda	42.74	8.00e-41	159.00
IUUC-Bdi-014232	Brachypodium distachyon	66.40	3.00e-78	283.00
IUUC-Hvu-047115	Hordeum vulgare	67.73	2.00e-77	281.00
IUUC-Lpe-050767	Leersia perrieri	69.44	1.00e-84	306.00
IUUC-Mac-064794	Musa acuminata	50.40	5.00e-62	230.00
IUUC-Oba-075838	Oryza barthii	70.63	2.00e-85	308.00
IUUC-Obr-076076	Oryza brachyantha	69.44	7.00e-81	292.00
IUUC-Ogl-077025	Oryza glaberrima	70.63	2.00e-85	308.00
IUUC-Ogu-078855	Oryza glumaepatula	70.63	1.00e-85	309.00
IUUC-Oin-079337	Oryza indica	70.63	1.00e-85	308.00
IUUC-Olo-080778	Oryza longistaminata	70.24	1.00e-85	309.00
IUUC-Ome-081351	Oryza meridionalis	69.84	5.00e-90	323.00
IUUC-Oni-082435	Oryza nivara	70.24	8.00e-89	319.00
IUUC-Opu-083140	Oryza punctata	70.63	3.00e-85	307.00
IUUC-Oru-084727	Oryza rufipogon	70.24	6.00e-85	306.00
IUUC-Osa-085427	Oryza sativa	70.63	2.00e-85	308.00
IUUC-Olu-087709	Ostreococcus lucimarinus	43.01	3.00e-17	79.00
IUUC-Sit-110756	Setaria italica	80.65	6.00e-95	339.00
IUUC-Sly-111171	Solanum lycopersicum	39.81	6.00e-29	120.00
IUUC-Stu-112652	Solanum tuberosum	41.55	5.00e-29	120.00
IUUC-Sbi-114443	Sorghum bicolor	87.15	1.00e-121	427.00
IUUC-Tae-124466	Triticum aestivum	68.92	8.00e-84	302.00
IUUC-Tur-126471	Triticum urartu	67.22	4.00e-76	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence