iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109731

Ensembl Protein ID

Si017273m

UniProt Accession

K3YSM8; K3YSM8_SETIT

Genbank Protein ID

KQL30926.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

LOC101754376; SETIT_017273mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017273m.g	Si017273m	Si017273m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-26	92.0	143	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+ +vt++a+ ++ + l sGs Dgt+++WD  tg +
   Q: 143  GHEKGVTGIALpTGsDKLYSGSKDGTVRMWDCQTGQC 179
           8**********855699****************9988 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MDVETDGRFG NKRVHNRLGP GSGGGPSSTT GKVCNYWRAG RCNRFPCPYL HSELPEAAAP 60
PKRPSGPGGN VWRNPNSGGR GGGGHNRWGR GPGGGSGTAA HRPPDRPCKY FLAGTDCSYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCTGCCAC CTATGGGCCG CGTGCGGAAA ACACAATCAA TAGCCGGAGT CGGGCCCTCG 60
GTTCCGCCCG CGACCGCGCG CGCGAGCTAA ACCCGACCCA GCAATCGGGC CACCGCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

sita:101754376

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002831	Amborella trichopoda	57.58	1.00e-137	482.00
IUUC-Aly-005699	Arabidopsis lyrata	57.46	4.00e-143	500.00
IUUC-Ath-007223	Arabidopsis thaliana	58.41	2.00e-141	494.00
IUUC-Bdi-014857	Brachypodium distachyon	80.46	0.00e+00	680.00
IUUC-Bol-016382	Brassica oleracea	57.67	3.00e-139	487.00
IUUC-Bra-017351	Brassica rapa	58.70	5.00e-143	500.00
IUUC-Gma-042894	Glycine max	59.23	1.00e-138	485.00
IUUC-Hvu-047824	Hordeum vulgare	78.93	1.00e-157	548.00
IUUC-Lpe-051596	Leersia perrieri	73.78	7.00e-165	572.00
IUUC-Mtr-058068	Medicago truncatula	58.93	1.00e-134	472.00
IUUC-Mac-065071	Musa acuminata	64.72	4.00e-161	560.00
IUUC-Oba-075769	Oryza barthii	74.06	4.00e-169	586.00
IUUC-Obr-076011	Oryza brachyantha	81.29	0.00e+00	688.00
IUUC-Ogu-078248	Oryza glumaepatula	74.48	1.00e-172	598.00
IUUC-Oin-079981	Oryza indica	82.99	0.00e+00	698.00
IUUC-Olo-080571	Oryza longistaminata	72.99	1.00e-159	555.00
IUUC-Ome-081598	Oryza meridionalis	73.79	2.00e-172	597.00
IUUC-Oni-082711	Oryza nivara	74.02	5.00e-173	599.00
IUUC-Opu-083451	Oryza punctata	78.21	0.00e+00	677.00
IUUC-Oru-085129	Oryza rufipogon	74.06	3.00e-169	587.00
IUUC-Osa-085619	Oryza sativa	80.77	7.00e-149	519.00
IUUC-Ppa-096012	Physcomitrella patens	53.71	5.00e-108	384.00
IUUC-Pop-099994	Populus trichocarpa	59.85	3.00e-142	497.00
IUUC-Ppe-101609	Prunus persica	58.94	2.00e-148	517.00
IUUC-Smo-108900	Selaginella moellendorffii	48.91	4.00e-98	350.00
IUUC-Sly-111514	Solanum lycopersicum	56.28	1.00e-132	465.00
IUUC-Stu-112646	Solanum tuberosum	56.15	7.00e-138	483.00
IUUC-Sbi-114748	Sorghum bicolor	89.77	0.00e+00	749.00
IUUC-Tca-121658	Theobroma cacao	57.62	3.00e-133	467.00
IUUC-Tae-125489	Triticum aestivum	80.88	0.00e+00	690.00
IUUC-Tur-126095	Triticum urartu	76.35	7.00e-123	433.00
IUUC-Vvi-131444	Vitis vinifera	58.61	3.00e-146	511.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence