iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057863

Ensembl Protein ID

AES96231

UniProt Accession

G7K1H8; G7K1H8_MEDTR

Genbank Protein ID

AES96231.1

Protein Name

RING-H2 finger protein ATL47

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g034790

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g034790	AES96231	AES96231

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	32.4	142	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C+H+fh +C+  w         + +CPlCr
   Q: 142  CAVCLCEFleQDKLRLLPnCNHAFHISCIDTW------LLSNSSCPLCR 184
           ********99555*******************......777888****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MHFFHSQIHN NNGAITNPSI ISPPYSSIPY NSEPTQISSS SGNKISPAIL FIIVILAIIF 60
FILGFLHLLV RFLIKHRSSS SSSTTTISQS NRFPEMSESD AYQRQLQQLF NLHDSGLDQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCTTCTA ATCTAATATG CTTATTGCTT GTTTTTATCA TAATGTATGA GTTGGGTTTA 60
ATCTCAAATC AAGCAAAGTT AATAACTTTA TTCAAAACCA CTTCATAATT TACAATCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_5g034790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002701	Amborella trichopoda	47.83	5.00e-61	227.00
IUUC-Aly-006330	Arabidopsis lyrata	60.38	1.00e-77	282.00
IUUC-Ath-006861	Arabidopsis thaliana	58.45	5.00e-74	270.00
IUUC-Gma-043709	Glycine max	72.03	4.00e-108	384.00
IUUC-Mac-065319	Musa acuminata	46.58	2.00e-58	218.00
IUUC-Sbi-114772	Sorghum bicolor	47.84	1.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence