iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057870

Ensembl Protein ID

AES99150

UniProt Accession

G7KFW3; A0A0C3XQ63; G7KFW3_MEDTR

Genbank Protein ID

AES99150.2

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g077160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g077160	AES99150	AES99150

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-12	47.3	280	324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.......sdtl..lvsGsdDgtikvWDlrtgvllk 37
           H++++t +++       s++l  l++Gs Dg++kvW  +t++llk
   Q: 280  HNSWITTMSWllfayesSNPLiiLATGSSDGSVKVWLGDTDKLLK 324
           ****************65588556************766666665 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGPTPLQSAM LMGSPCFPNA ISWSDDNLIA VASAHFVTIL RPDMPNGPRG LIKVLPRQPL 60
ILGFLQRQDL LSGCLMPTSL YRDDKPVVRS ISWSPLGMAA NSGCLLAVCT SEGHVKVYRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCCAA CTCCGTTACA GTCAGCAATG CTAATGGGTT CACCCTGTTT TCCTAACGCC 60
ATTTCTTGGT CTGATGACAA CCTCATTGCT GTTGCTTCTG CTCATTTCGT CACCATTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_5g077160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	40.24	2.00e-116	412.00
IUUC-Aly-005715	Arabidopsis lyrata	42.19	0.00e+00	630.00
IUUC-Ath-007637	Arabidopsis thaliana	42.49	0.00e+00	658.00
IUUC-Bol-016169	Brassica oleracea	45.24	3.00e-141	495.00
IUUC-Bra-017736	Brassica rapa	42.98	0.00e+00	643.00
IUUC-Gma-044065	Glycine max	71.85	0.00e+00	1178.00
IUUC-Hvu-047339	Hordeum vulgare	47.76	4.00e-08	48.50
IUUC-Ppa-095823	Physcomitrella patens	30.95	6.00e-72	264.00
IUUC-Pop-098900	Populus trichocarpa	47.39	0.00e+00	788.00
IUUC-Smo-108757	Selaginella moellendorffii	31.81	1.00e-66	247.00
IUUC-Tae-124422	Triticum aestivum	38.10	2.00e-115	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence