iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098900

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_569617; POPTR_0012s02880g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s02880	POPTR_0012s02880.1	POPTR_0012s02880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-09	37.7	330	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sd..tllvsGsdDgtikvW 28
           H+++vt +++      s+   ll+sGs Dg++++W
   Q: 330  HNSWVTTISLallgskSNpqVLLASGSSDGSVRIW 364
           *******99999***9444588************* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASRFQAVAL VASPSYPNSI AWSDDNFIAV ASAHLVTILN PAVPYGPRGL IRVPTCEPYP 60
IGCVNREDLF TNCMLPAALS RDRRPCVRSI SWSPIGMAPN YGCLLAVCTV EGRVKIYRPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGC GATTCCAGGC GGTGGCGTTA GTGGCGTCGC CGTCGTATCC AAACTCCATT 60
GCTTGGTCCG ACGATAACTT CATCGCCGTC GCTTCCGCTC ACCTCGTCAC CATTCTGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0012s02880g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	44.61	1.00e-120	427.00
IUUC-Aly-005715	Arabidopsis lyrata	47.03	0.00e+00	729.00
IUUC-Ath-007637	Arabidopsis thaliana	47.70	0.00e+00	778.00
IUUC-Bdi-014902	Brachypodium distachyon	40.79	3.00e-171	595.00
IUUC-Bol-016169	Brassica oleracea	48.94	2.00e-155	542.00
IUUC-Bra-017736	Brassica rapa	47.68	0.00e+00	754.00
IUUC-Gma-043537	Glycine max	49.71	1.00e-170	592.00
IUUC-Hvu-047339	Hordeum vulgare	41.98	7.00e-07	44.30
IUUC-Mtr-057870	Medicago truncatula	47.39	0.00e+00	761.00
IUUC-Mac-065235	Musa acuminata	43.33	1.00e-138	486.00
IUUC-Ogl-077286	Oryza glaberrima	40.21	2.00e-126	446.00
IUUC-Oin-079863	Oryza indica	40.06	1.00e-137	483.00
IUUC-Oru-084242	Oryza rufipogon	40.46	2.00e-75	277.00
IUUC-Osa-085660	Oryza sativa	44.02	4.00e-88	319.00
IUUC-Ppa-095823	Physcomitrella patens	34.19	9.00e-91	327.00
IUUC-Ppe-101763	Prunus persica	56.81	0.00e+00	924.00
IUUC-Smo-108757	Selaginella moellendorffii	33.16	3.00e-122	432.00
IUUC-Sit-110507	Setaria italica	41.14	2.00e-178	619.00
IUUC-Sly-111401	Solanum lycopersicum	48.99	2.00e-158	552.00
IUUC-Stu-112879	Solanum tuberosum	48.85	3.00e-124	438.00
IUUC-Tca-121440	Theobroma cacao	58.06	0.00e+00	1004.00
IUUC-Tae-124422	Triticum aestivum	41.47	0.00e+00	637.00
IUUC-Vvi-131537	Vitis vinifera	57.69	0.00e+00	681.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence