iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134876

Ensembl Protein ID

Zm00001d037774_T001

UniProt Accession

B4F9B9; B4F9B9_MAIZE

Genbank Protein ID

ACF78712.1; ACF85298.1; ACF85603.1; ACG37401.1; AQK84770.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

BT033707; BT040293; BT040598; EU965283; CM000782

Gene Name

ZEAMMB73_Zm00001d037774

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d037774	Zm00001d037774_T002	Zm00001d037774_T002
Zm00001d037774	Zm00001d037774_T001	Zm00001d037774_T001
Zm00001d037774	Zm00001d037774_T005	Zm00001d037774_T005
Zm00001d037774	Zm00001d037774_T003	Zm00001d037774_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.10e-15	58.1	141	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrtlt...........elkn.sevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           vkvs++g+++++++dl+ + +++dL  a++++            e+++  e+ l+YeD+dGD++ l++D++++++ +      s+ rl+i
   Q: 141  VKVSMDGAPYLRKIDLKTYKNYKDLSTALEKMFsgfstgkdglsEYRKdGEYVLTYEDKDGDWM-LVGDVPWEMFAD------SCRRLRI 223
           9******************************3346667888888999889**************.************......******* PP
   S: 82   qk 83
           +k
   Q: 224  MK 225
           98 PP

Organism

Zea mays

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPLDLDYI GLSPAAAAAA AHDDLKGTEL RLGLPGSGSP DRRVVAATAT TLDLLPAKGA 60
KRGFSDEAPT PSPGAASGKG KKVAEEEDDK KVAATPQPVA KAQVVGWPPI RSYRKNTMST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAAACCA CTCTTCGCTT CGACTCCCAC TCCCACTCTC CCTTTCCACT CTCAGGCTCC 60
CACTCCCCCC CTACCGGCTA CCCTACCCAT CACACACAAA CAGCCACTCC TCACCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

zma:100191581

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002452	Amborella trichopoda	43.97	2.00e-60	225.00
IUUC-Aly-005481	Arabidopsis lyrata	48.74	2.00e-53	201.00
IUUC-Bta-012950	Bos taurus	25.00	4.90e-02	31.60
IUUC-Bol-015732	Brassica oleracea	49.81	1.00e-56	213.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	4.20e-01	26.90
IUUC-Cja-019530	Callithrix jacchus	25.00	4.30e-02	32.00
IUUC-Cfa-020019	Canis familiaris	25.00	6.00e-02	31.60
IUUC-Cpo-021749	Cavia porcellus	25.00	4.70e-02	32.00
IUUC-Csa-023127	Chlorocebus sabaeus	25.00	3.60e-02	31.60
IUUC-Dno-029244	Dasypus novemcinctus	25.00	5.30e-02	31.60
IUUC-Dor-030191	Dipodomys ordii	26.25	5.70e-02	31.60
IUUC-Eca-033719	Equus caballus	25.00	4.40e-02	32.00
IUUC-Eeu-035270	Erinaceus europaeus	25.00	2.20e-02	33.10
IUUC-Fca-035804	Felis catus	25.00	4.70e-02	32.00
IUUC-Gmo-038472	Gadus morhua	23.16	1.60e-01	29.30
IUUC-Gma-043013	Glycine max	45.79	5.00e-60	223.00
IUUC-Hsa-045687	Homo sapiens	25.00	4.90e-02	32.00
IUUC-Itr-048521	Ictidomys tridecemlineatus	25.00	4.30e-02	32.00
IUUC-Lch-049822	Latimeria chalumnae	23.91	1.20e-01	30.40
IUUC-Laf-053735	Loxodonta africana	25.00	4.60e-02	32.00
IUUC-Mcc-054955	Macaca mulatta	25.00	4.70e-02	32.00
IUUC-Mtr-058756	Medicago truncatula	54.10	9.00e-64	236.00
IUUC-Mmr-061160	Microcebus murinus	25.00	3.40e-02	32.00
IUUC-Mdo-062388	Monodelphis domestica	25.00	4.20e-02	32.00
IUUC-Mmu-063730	Mus musculus	25.00	5.70e-02	31.60
IUUC-Mac-064563	Musa acuminata	56.85	2.00e-73	268.00
IUUC-Mpu-065683	Mustela putorius furo	25.00	5.00e-02	31.60
IUUC-Mlu-067270	Myotis lucifugus	25.00	1.70e-02	33.10
IUUC-Nle-069491	Nomascus leucogenys	25.00	4.60e-02	32.00
IUUC-Opr-071160	Ochotona princeps	25.00	5.30e-02	31.60
IUUC-Ont-071943	Oreochromis niloticus	23.75	2.30e-01	29.60
IUUC-Oan-073255	Ornithorhynchus anatinus	25.00	4.10e-02	32.00
IUUC-Oba-075593	Oryza barthii	92.13	7.00e-67	244.00
IUUC-Ogu-078946	Oryza glumaepatula	92.81	4.00e-74	270.00
IUUC-Ome-081266	Oryza meridionalis	50.68	2.00e-48	184.00
IUUC-Opu-083799	Oryza punctata	70.80	2.00e-82	297.00
IUUC-Oga-088931	Otolemur garnettii	25.00	4.20e-02	32.00
IUUC-Oar-089653	Ovis aries	25.00	4.50e-02	32.00
IUUC-Ptr-091043	Pan troglodytes	25.00	4.90e-02	32.00
IUUC-Pfo-096649	Poecilia formosa	23.75	3.10e-01	29.30
IUUC-Pab-098182	Pongo abelii	25.00	4.70e-02	32.00
IUUC-Pop-099102	Populus trichocarpa	43.38	8.00e-55	206.00
IUUC-Ppe-101672	Prunus persica	42.72	9.00e-56	210.00
IUUC-Rno-105324	Rattus norvegicus	25.00	5.50e-02	31.60
IUUC-Sha-106837	Sarcophilus harrisii	25.00	4.10e-02	32.00
IUUC-Sly-111221	Solanum lycopersicum	47.65	8.00e-55	206.00
IUUC-Stu-112871	Solanum tuberosum	50.97	1.00e-58	219.00
IUUC-Sbi-114334	Sorghum bicolor	91.57	3.00e-99	353.00
IUUC-Tsy-119108	Tarsius syrichta	25.00	4.40e-02	32.00
IUUC-Tni-120677	Tetraodon nigroviridis	23.75	2.70e-01	29.30
IUUC-Tbe-127251	Tupaia belangeri	25.00	5.30e-02	31.60
IUUC-Ttr-129157	Tursiops truncatus	25.00	5.30e-02	31.60
IUUC-Xtr-132566	Xenopus tropicalis	25.00	5.70e-02	31.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence