iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099569

Ensembl Protein ID

POPTR_0003s04950.1

UniProt Accession

B9GXD1; B9GXD1_POPTR

Genbank Protein ID

EEE78278.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_553750; POPTR_0003s04950g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s04950	POPTR_0003s04950.1	POPTR_0003s04950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-24	83.6	184	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af........sd.tllvsGsdDgtikvWDlrtg 33
           gH ++++c+ af         d +++++Gs Dg++k+W++++ 
   Q: 184  GHRGPIRCVtAFlgrleddnEDgCTICTGSLDGVLKLWRVTRT 226
           8*******9459*****98633699**************9875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MISQMKHVGP ITSLAINLSD DIIYSASLDR TVKVWRISDL KCIETIQAHL EPVNAVVVAD 60
DGILYTASDD ASIRVWRRNF CSGEWPHSLT VTLSSKHSPV RTLTLTSDNG VLYGGCTDGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGGTCAAT GGAATGTCGT TGATTATTTA AAACAAAAAC ATGAATGTTC CGTTCACATA 60
CATATGATTA GCCAAGTAAT TGGTTTTGAT GATGTTAATG TAACAGATGA AGCATGTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0003s04950g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002624	Amborella trichopoda	48.97	2.00e-66	245.00
IUUC-Gma-043417	Glycine max	74.06	2.00e-105	375.00
IUUC-Mtr-058275	Medicago truncatula	71.95	4.00e-104	371.00
IUUC-Ppe-101652	Prunus persica	76.54	2.00e-102	365.00
IUUC-Sly-111754	Solanum lycopersicum	73.25	6.00e-107	380.00
IUUC-Stu-112791	Solanum tuberosum	73.25	7.00e-107	380.00
IUUC-Tca-121239	Theobroma cacao	77.08	3.00e-112	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence