iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112277

Ensembl Protein ID

PGSC0003DMT400097765

UniProt Accession

M1E1D3; M1E1D3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400047336	PGSC0003DMT400097765	PGSC0003DMT400097765

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.4	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+d +dg   ++lp C+H fh dC+ +w       + + +CPlCr
   Q: 102  CSVCLTDVSDGekARLLPkCNHGFHVDCIDMW------FQSHSTCPLCR 144
           ********55555899999*************......9999******8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGSGKLGDSG MIAITAKIMM AVVVFLFFAV VLVFFLHIYA KFFTREDANP NDGTRRRRRR 60
RFDFAGGYQE VNALRRGLDP SILKTIPVIP FNTKDFKDGL ECSVCLTDVS DGEKARLLPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAGTG GTAAATTAGG TGATTCAGGT ATGATTGCGA TCACGGCTAA GATCATGATG 60
GCTGTCGTCG TATTTCTCTT CTTTGCGGTG GTCTTGGTAT TTTTCCTTCA CATATACGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102585558

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003085	Amborella trichopoda	37.80	3.00e-33	134.00
IUUC-Bol-015888	Brassica oleracea	53.24	3.00e-36	144.00
IUUC-Bra-016720	Brassica rapa	53.96	3.00e-37	147.00
IUUC-Mac-065123	Musa acuminata	42.08	2.00e-39	154.00
IUUC-Sly-111311	Solanum lycopersicum	80.46	4.00e-101	359.00
IUUC-Sbi-114427	Sorghum bicolor	49.19	4.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence