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Tag Content
UUCD2 ID IUUC-Pop-099860
UUCD1 version UUC-PoT-01704
Ensembl Protein ID POPTR_0005s17820.1
UniProt Accession B9H6W2; B9H6W2_POPTR
Genbank Protein ID EEE94340.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000341
Gene Name POPTRDRAFT_209220; POPTR_0005s17820g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s17820 POPTR_0005s17820.1 POPTR_0005s17820.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 6.60e-75 253.5 591 895
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
    +Gl N gN+CY N+vLQcL+++p+l++++ + + ++ +++ ++++++++++ + k+ k+ sp +l++l+++ +++ + +++
   Q: 591 CGLINCGNSCYANAVLQCLAFTPPLTSFFVQgL-----HSKSCLNRECCFSCEFESIILKA-KEGKSPLSPLGILSQLQNIGSQLGNGREE 675
    7******************************43.....3344466799**********988.99999************************ PP
   S: 91 DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
    Da+Efl++ +d++++ + +e + + + ++++li +F+g l+s+ikc +c+ +s+r+e ++dl+++++g+
   Q: 676 DAHEFLRYAIDAMQSVC--------LKEAGV--------NAMDSFAEETTLIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGNIG 750
    *****************........222222........23344567899***************************************95 PP
   S: 182 tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
    +l+d+L+ ft++e l+g+nky+c +ck++ +a+kk+++ + P+vL++ LkRf ++ ++ k+nk++ fp+ Ldl+p+++ +++k
   Q: 751 ----KLEDALRRFTSAEILDGDNKYQCGRCKSYEKAKKKMTILEAPNVLTIALKRF---QS-GKFGKLNKSIRFPEILDLAPYMSGTSDK- 832
    ....8***************************************************...33.4557********************6655. PP
   S: 273 kekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    + +Y+L++v+vH + sGHYv+yvkn ++kW+++dDs+Vt+v+ e+vl+ + aY+l+Y r
   Q: 833 --SPIYRLYGVIVHLDvmnAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLS---KGAYMLLYAR 895
    ..79**********873325569********************************...********87 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MHVEGDLGFS SLVVLVFCVV IIPLGCFIIR CKWRGAVARK EDIKRLLVLA AEEAARAEFE 60
AAASYGTVPV LTNNYQCAVC FCPTTTRCAR CKAVRYCSGK CQIIHWRQGH KEECHPPTTT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099860|DUB,USP|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTTTCTCCT TCTTAATTCC CCCTCTTTGA AAATAAACAA AAACAAAAAC AAGAAGCCCT 60
GAAATCTCGA TCTGATTGTC CGAAAATCCT CTAGCTAAAA GACCACTTTT TTTTTTCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099860|DUB,USP|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG pop:POPTR_0005s17820g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002920 Amborella trichopoda 68.48 2.00e-158 552.00
IUUC-Aly-005811 Arabidopsis lyrata 44.42 0.00e+00 651.00
IUUC-Cne-027049 Cryptococcus neoformans 32.49 5.00e-36 145.00
IUUC-Gma-044069 Glycine max 51.38 0.00e+00 778.00
IUUC-Mtr-058629 Medicago truncatula 49.26 0.00e+00 759.00
IUUC-Mac-065141 Musa acuminata 55.63 5.00e-164 571.00
IUUC-Ppe-101801 Prunus persica 54.51 0.00e+00 884.00
IUUC-Tca-121756 Theobroma cacao 55.83 0.00e+00 929.00
Created Date 25-Jun-2017

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