iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114180

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G441100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g041450	Sb01g041450.1	Sb01g041450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-34	118.2	34	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++++CpIsl+lMrdPv++p+Gitydr+sIe wl++g+ tcPvt++pl++edlvPn+++rr+iq+wc +n+s
   Q: 34   IPAHYRCPISLDLMRDPVTAPTGITYDRESIEAWLDTGRATCPVTHAPLRHEDLVPNHAIRRVIQDWCVANRS 106
           89*******************************************************************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALLVRRARR AATKAAVSLG GGGGSGSSSV ELAIPAHYRC PISLDLMRDP VTAPTGITYD 60
RESIEAWLDT GRATCPVTHA PLRHEDLVPN HAIRRVIQDW CVANRSRGVE RIPTPKIPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCTGC TGGTGCGGAG GGCACGCAGG GCGGCGACCA AGGCCGCGGT GTCGCTCGGC 60
GGCGGCGGCG GCAGCGGCAG CAGCAGCGTG GAGCTCGCGA TCCCGGCGCA CTACCGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_01g041450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	45.95	6.00e-99	353.00
IUUC-Bdi-014295	Brachypodium distachyon	76.00	2.00e-161	560.00
IUUC-Bol-015846	Brassica oleracea	38.65	3.00e-73	268.00
IUUC-Bra-017718	Brassica rapa	38.73	6.00e-75	273.00
IUUC-Lpe-050847	Leersia perrieri	74.35	1.00e-160	558.00
IUUC-Mtr-057926	Medicago truncatula	41.26	5.00e-83	300.00
IUUC-Mac-064511	Musa acuminata	52.84	1.00e-100	358.00
IUUC-Oba-075321	Oryza barthii	83.17	5.00e-49	186.00
IUUC-Ogl-076969	Oryza glaberrima	80.19	3.00e-172	597.00
IUUC-Ogu-078872	Oryza glumaepatula	78.70	6.00e-176	609.00
IUUC-Oin-079622	Oryza indica	80.19	3.00e-172	597.00
IUUC-Olo-080664	Oryza longistaminata	79.14	2.00e-118	417.00
IUUC-Ome-081144	Oryza meridionalis	76.37	6.00e-124	436.00
IUUC-Oni-082871	Oryza nivara	80.19	3.00e-172	597.00
IUUC-Opu-084061	Oryza punctata	79.29	1.00e-167	582.00
IUUC-Oru-084561	Oryza rufipogon	80.19	3.00e-172	597.00
IUUC-Osa-086045	Oryza sativa	80.19	3.00e-172	597.00
IUUC-Olu-087884	Ostreococcus lucimarinus	61.19	9.00e-24	100.00
IUUC-Ppa-095941	Physcomitrella patens	36.24	4.00e-61	228.00
IUUC-Pop-099887	Populus trichocarpa	45.54	2.00e-94	338.00
IUUC-Ppe-101692	Prunus persica	48.72	7.00e-92	330.00
IUUC-Smo-108988	Selaginella moellendorffii	36.48	8.00e-60	223.00
IUUC-Sit-109976	Setaria italica	88.71	0.00e+00	668.00
IUUC-Sly-110989	Solanum lycopersicum	41.65	2.00e-94	338.00
IUUC-Stu-112581	Solanum tuberosum	44.60	2.00e-89	322.00
IUUC-Tca-120967	Theobroma cacao	46.46	4.00e-92	330.00
IUUC-Tae-122962	Triticum aestivum	80.28	4.00e-174	603.00
IUUC-Tur-126397	Triticum urartu	78.57	2.00e-89	320.00
IUUC-Vvi-131485	Vitis vinifera	49.88	7.00e-96	343.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence