iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131072

UUCD1 version

UUC-ViV-00565

Ensembl Protein ID

VIT_00s0349g00040.t01

UniProt Accession

F6H5I9; F6H5I9_VITVI

Genbank Protein ID

CCB47478.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595236

Gene Name

VIT_00s0349g00040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0349g00040	VIT_00s0349g00040.t01	VIT_00s0349g00040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-08	34.9	60	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++++g     +vlpC H fh+ C+ kw     + + + +CP+Cr
   Q: 60   CSICLSRYREGigqgARVLPCMHKFHKACIDKW-----FNMCRKTCPVCR 104
           ********665555599****************.....8899999****8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MVMVKKLLAF ILNLIGLRSR QSIKEASTYE VAVGLGSQEK AKGGSAEVKL EGEGDECELC 60
SICLSRYREG IGQGARVLPC MHKFHKACID KWFNMCRKTC PVCRFSMGAE ENFQKREELT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAACCCAA TGGTTATGGT CAAGAAACTG CTGGCTTTCA TTCTAAACTT GATTGGTCTG 60
CGATCCCGGC AAAGCATCAA GGAAGCTTCA ACTTATGAAG TGGCGGTAGG GTTGGGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001107	Aegilops tauschii	38.54	1.00e-15	73.90
IUUC-Atr-003149	Amborella trichopoda	46.36	7.00e-24	101.00
IUUC-Ath-007349	Arabidopsis thaliana	46.91	4.00e-15	71.20
IUUC-Bdi-014272	Brachypodium distachyon	39.78	2.00e-17	79.70
IUUC-Bol-016411	Brassica oleracea	41.67	2.00e-13	65.90
IUUC-Bra-017132	Brassica rapa	41.67	9.00e-14	67.00
IUUC-Gma-043573	Glycine max	41.48	3.00e-24	103.00
IUUC-Hvu-047425	Hordeum vulgare	38.78	4.00e-16	75.90
IUUC-Lpe-051646	Leersia perrieri	37.50	7.00e-19	84.70
IUUC-Mtr-058073	Medicago truncatula	40.60	2.00e-22	96.70
IUUC-Mac-065194	Musa acuminata	46.25	2.00e-17	79.30
IUUC-Oba-075537	Oryza barthii	44.58	5.00e-18	82.00
IUUC-Obr-076744	Oryza brachyantha	37.84	6.00e-18	81.60
IUUC-Ogl-077202	Oryza glaberrima	44.58	5.00e-18	82.00
IUUC-Ogu-078719	Oryza glumaepatula	44.58	5.00e-18	82.00
IUUC-Oin-079328	Oryza indica	44.58	5.00e-18	82.00
IUUC-Olo-080984	Oryza longistaminata	45.78	1.00e-18	84.00
IUUC-Ome-081534	Oryza meridionalis	44.58	5.00e-18	82.00
IUUC-Oni-082733	Oryza nivara	44.58	5.00e-18	82.00
IUUC-Opu-083956	Oryza punctata	43.37	2.00e-17	79.30
IUUC-Oru-084287	Oryza rufipogon	44.58	5.00e-18	82.00
IUUC-Osa-085711	Oryza sativa	44.58	5.00e-18	82.00
IUUC-Ppe-101424	Prunus persica	55.13	2.00e-23	99.80
IUUC-Sit-110455	Setaria italica	44.58	2.00e-17	79.70
IUUC-Stu-112532	Solanum tuberosum	57.32	7.00e-23	98.20
IUUC-Sbi-114574	Sorghum bicolor	33.65	6.00e-16	74.70
IUUC-Tca-121024	Theobroma cacao	51.09	4.00e-37	145.00
IUUC-Tae-124267	Triticum aestivum	44.74	1.00e-18	83.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence