iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100053

UUCD1 version

UUC-PoT-00498

Ensembl Protein ID

POPTR_0017s12580.1

UniProt Accession

A9P947; A9P947_POPTR

Genbank Protein ID

ABK92900.1; EEF04017.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EF144676; CM000353

Gene Name

POPTRDRAFT_814469; POPTR_0017s12580g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s12580	POPTR_0017s12580.1	POPTR_0017s12580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-09	37.8	45	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+   +w     p l+ +   +++CP+C+
   Q: 45   CPICWESFnivENVPYVLWCGHTLCKNCIlgLQWavvkfPTLPIQLPLFISCPWCN 100
           ********999999***************99999*********************7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MWNFASKCLA GSVSLNNSLK PAQVPSEYSD DEASSVVSRE EGLECPICWE SFNIVENVPY 60
VLWCGHTLCK NCILGLQWAV VKFPTLPIQL PLFISCPWCN LLSFRLVYRG NLKFPRKNYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGGAGAAA GACATGGAGG GGAACCCCTC TTAATTTCTT TTCGTTCTCT GTTAAACCCC 60
CTTCTTGATA AACTGGTAAG GCCATGTCAT GAACTGTTTC TTTTCTTTTT CTTTTTACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0017s12580g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	62.96	2.00e-72	265.00
IUUC-Atr-002488	Amborella trichopoda	64.36	3.00e-83	300.00
IUUC-Aly-005618	Arabidopsis lyrata	61.94	6.00e-80	289.00
IUUC-Ath-007373	Arabidopsis thaliana	63.20	3.00e-81	294.00
IUUC-Bdi-014158	Brachypodium distachyon	66.25	8.00e-85	305.00
IUUC-Bol-016548	Brassica oleracea	64.94	1.00e-85	308.00
IUUC-Bra-017276	Brassica rapa	61.80	1.00e-81	295.00
IUUC-Dme-031708	Drosophila melanogaster	47.06	3.00e-04	40.40
IUUC-Gma-043252	Glycine max	76.78	2.00e-112	397.00
IUUC-Hvu-047109	Hordeum vulgare	64.96	5.00e-70	256.00
IUUC-Lpe-051412	Leersia perrieri	65.17	5.00e-91	326.00
IUUC-Loc-051895	Lepisosteus oculatus	32.04	1.00e-07	48.90
IUUC-Mtr-057842	Medicago truncatula	72.76	5.00e-107	379.00
IUUC-Mac-064832	Musa acuminata	65.43	2.00e-90	324.00
IUUC-Oba-075020	Oryza barthii	65.28	4.00e-93	333.00
IUUC-Obr-076124	Oryza brachyantha	64.94	3.00e-82	297.00
IUUC-Ogl-077905	Oryza glaberrima	65.28	4.00e-93	333.00
IUUC-Ogu-078854	Oryza glumaepatula	65.66	1.00e-93	335.00
IUUC-Oin-079896	Oryza indica	65.28	2.00e-93	334.00
IUUC-Olo-080692	Oryza longistaminata	65.28	3.00e-93	333.00
IUUC-Oni-082962	Oryza nivara	65.66	1.00e-93	335.00
IUUC-Opu-084174	Oryza punctata	66.67	2.00e-93	334.00
IUUC-Oru-084363	Oryza rufipogon	65.28	8.00e-93	332.00
IUUC-Osa-085569	Oryza sativa	65.28	8.00e-93	332.00
IUUC-Pfo-097469	Poecilia formosa	34.38	1.00e-05	45.80
IUUC-Ppe-101521	Prunus persica	78.73	2.00e-110	391.00
IUUC-Smo-109392	Selaginella moellendorffii	38.70	1.00e-32	132.00
IUUC-Sit-109790	Setaria italica	66.54	5.00e-84	303.00
IUUC-Sly-111787	Solanum lycopersicum	75.84	1.00e-114	405.00
IUUC-Stu-112131	Solanum tuberosum	76.21	4.00e-115	406.00
IUUC-Sbi-114279	Sorghum bicolor	65.41	5.00e-86	310.00
IUUC-Tru-118270	Takifugu rubripes	35.94	4.00e-06	47.00
IUUC-Tca-121818	Theobroma cacao	80.60	2.00e-99	355.00
IUUC-Tae-124848	Triticum aestivum	63.33	2.00e-68	251.00
IUUC-Tur-126036	Triticum urartu	64.07	3.00e-70	257.00
IUUC-Vvi-131684	Vitis vinifera	79.93	5.00e-109	386.00
IUUC-Xma-133160	Xiphophorus maculatus	34.38	1.00e-05	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence