iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121818

Ensembl Protein ID

EOY03585

UniProt Accession

A0A061EF09; A0A061EF09_THECC

Genbank Protein ID

EOY03585.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001882

Gene Name

TCM_018694

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_018694	EOY03585	EOY03585

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.4	82	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+   +w     p l+ +   +++CP+C+
   Q: 82   CPICCESFnivENVPYVLWCGHTLCKNCIlgLQWavvnfPTLPIQLPLFISCPWCN 137
           ********999999***************99999*********************7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MQLKWEMLTE VFLPMVQFLL LENDALCVIT VFLVINMWSF ASNCIAGTVG LRNDSLKQSH 60
AASECSDDES SSVVSREEGL ECPICCESFN IVENVPYVLW CGHTLCKNCI LGLQWAVVNF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACTCACTT AAATTTTATG CCTTGTTTAT TATATTTATA GCAGACTAAT TCCAGAGAGT 60
CAGAGAACCA AAAACACAGA GTAAAAAACA GAGAGAGAAA GAGACAGATC TCCAACTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	66.29	5.00e-77	279.00
IUUC-Atr-002488	Amborella trichopoda	65.19	2.00e-84	304.00
IUUC-Aly-005618	Arabidopsis lyrata	62.17	2.00e-78	284.00
IUUC-Ath-007373	Arabidopsis thaliana	62.17	8.00e-79	285.00
IUUC-Bdi-014924	Brachypodium distachyon	65.17	2.00e-73	268.00
IUUC-Bol-016548	Brassica oleracea	62.59	2.00e-77	280.00
IUUC-Bra-017276	Brassica rapa	58.58	7.00e-72	262.00
IUUC-Dme-031708	Drosophila melanogaster	50.00	3.00e-05	43.10
IUUC-Gma-044149	Glycine max	74.53	3.00e-103	366.00
IUUC-Hvu-047109	Hordeum vulgare	64.42	2.00e-73	267.00
IUUC-Lpe-050700	Leersia perrieri	65.54	3.00e-73	266.00
IUUC-Mtr-057842	Medicago truncatula	72.66	5.00e-101	359.00
IUUC-Mac-064923	Musa acuminata	66.54	1.00e-75	275.00
IUUC-Oba-075337	Oryza barthii	65.79	2.00e-73	267.00
IUUC-Obr-076124	Oryza brachyantha	64.91	3.00e-84	303.00
IUUC-Ogl-077305	Oryza glaberrima	65.79	2.00e-73	267.00
IUUC-Ogu-078906	Oryza glumaepatula	65.79	2.00e-73	267.00
IUUC-Oin-079896	Oryza indica	64.29	2.00e-85	307.00
IUUC-Olo-080692	Oryza longistaminata	64.29	5.00e-85	306.00
IUUC-Oni-082621	Oryza nivara	65.79	2.00e-73	267.00
IUUC-Opu-083804	Oryza punctata	66.17	1.00e-73	268.00
IUUC-Oru-084889	Oryza rufipogon	65.54	2.00e-73	267.00
IUUC-Osa-085667	Oryza sativa	65.79	2.00e-73	267.00
IUUC-Ppa-096025	Physcomitrella patens	44.74	5.00e-49	186.00
IUUC-Pop-100053	Populus trichocarpa	80.60	3.00e-100	357.00
IUUC-Ppe-101521	Prunus persica	76.03	1.00e-101	362.00
IUUC-Smo-109392	Selaginella moellendorffii	38.16	3.00e-30	124.00
IUUC-Sit-110791	Setaria italica	62.92	6.00e-69	253.00
IUUC-Sly-111787	Solanum lycopersicum	72.12	1.00e-103	368.00
IUUC-Stu-112131	Solanum tuberosum	72.86	2.00e-104	370.00
IUUC-Sbi-114208	Sorghum bicolor	64.04	1.00e-69	255.00
IUUC-Tae-125903	Triticum aestivum	66.67	3.00e-76	277.00
IUUC-Tur-126036	Triticum urartu	66.29	3.00e-75	273.00
IUUC-Vvi-130901	Vitis vinifera	77.32	3.00e-94	337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence