iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016911

Ensembl Protein ID

Bra037824.1-P

UniProt Accession

M4F9R1; M4F9R1_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037824	Bra037824.1	Bra037824.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-16	61.8	74	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavslla 71
           ++vkvs++g+++++++dl+++g++ +L +a+++ +t                          l+++++ l+YeD+dGD++ l++D++++++++   
   Q: 74   LFVKVSMDGAPYLRKVDLRSYGNYGELSSALEKmFTtftlgqcgsngaagkdmlretklkdFLNGKDYVLTYEDKDGDWM-LVGDVPWEMFID--- 165
           58*******************************844688********************977777***************.************... PP
   S: 72   skksllrlliqk 83
               +++l i+k
   Q: 166  ---VCKKLKIMK 174
           ...688888876 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MFPEAVANQS VVKKEVTTNI PKGQLSTTNN SSSPPAAKAQ IVGWPPVRSY RKNTLATTCK 60
NSDEVDGKPG SAALFVKVSM DGAPYLRKVD LRSYGNYGEL SSALEKMFTT FTLGQCGSNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTCCTG AAGCTGTAGC TAACCAATCT GTTGTAAAGA AGGAAGTGAC AACAAACATA 60
CCCAAGGGAC AGTTGAGCAC TACAAACAAT AGCTCTAGTC CACCTGCAGC CAAGTAATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	63.41	7.00e-72	263.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence