iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135700

Ensembl Protein ID

Zm00001d002504_T002

UniProt Accession

B4F8A5; B4F8A5_MAIZE

Genbank Protein ID

ACF78348.1; ACF86196.1; ACF86435.1; ACG34729.1; ONM14560.1

Protein Name

Set1 complex component swd2; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

BT033343; BT041191; BT041430; EU962611; CM007648

Gene Name

ZEAMMB73_Zm00001d002504

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d002504	Zm00001d002504_T002	Zm00001d002504_T002
Zm00001d002504	Zm00001d002504_T001	Zm00001d002504_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-23	83.3	115	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d+v c++f s+   ++sGs D t+ +WD 
   Q: 115  GHLDRVVCISFcSEkENFLSGSLDRTVLLWDQ 146
           8**********988888**************5 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTSPPRVSME ITDDMLKSME VGLAFRDYNG RISSMDFHSK ATNYLVTASD DESIRLYDTQ 60
NAVCLKTINS KKYGVELVCF TDNPNIVLYS SKNGWDESLR LLSLNDNRFL RYFKGHLDRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTATAAAC ACTGCCAATT AGTCCGCGCC GGACCTCCAA CCCGCCCCCA CGGCCCACGC 60
CATCCTCCGC ACCCCCCACG CCGGACAACC GGGGCTCGCC GCGCCGCTAC GCTCCCAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

zma:100273578

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	87.31	1.00e-170	591.00
IUUC-Atr-002607	Amborella trichopoda	71.70	9.00e-138	482.00
IUUC-Aly-005462	Arabidopsis lyrata	66.87	6.00e-129	452.00
IUUC-Ath-006609	Arabidopsis thaliana	66.25	4.00e-128	450.00
IUUC-Bdi-014222	Brachypodium distachyon	86.65	9.00e-172	595.00
IUUC-Bol-015485	Brassica oleracea	65.54	4.00e-128	450.00
IUUC-Bra-016914	Brassica rapa	65.85	9.00e-129	452.00
IUUC-Gma-042835	Glycine max	71.65	1.00e-138	485.00
IUUC-Hvu-047690	Hordeum vulgare	86.07	1.00e-168	584.00
IUUC-Lpe-050812	Leersia perrieri	87.27	5.00e-169	586.00
IUUC-Mtr-058607	Medicago truncatula	69.85	1.00e-134	471.00
IUUC-Mac-064497	Musa acuminata	77.74	4.00e-150	523.00
IUUC-Oba-075229	Oryza barthii	87.54	1.00e-169	588.00
IUUC-Obr-076490	Oryza brachyantha	87.23	3.00e-169	587.00
IUUC-Ogl-077381	Oryza glaberrima	87.58	2.00e-168	584.00
IUUC-Ogu-078068	Oryza glumaepatula	87.81	3.00e-169	586.00
IUUC-Oin-079415	Oryza indica	87.85	3.00e-169	587.00
IUUC-Olo-080773	Oryza longistaminata	76.88	8.00e-143	498.00
IUUC-Ome-081277	Oryza meridionalis	74.77	3.00e-134	469.00
IUUC-Oni-082990	Oryza nivara	87.85	6.00e-170	589.00
IUUC-Opu-083374	Oryza punctata	87.23	6.00e-170	589.00
IUUC-Oru-084354	Oryza rufipogon	87.85	9.00e-170	589.00
IUUC-Osa-086154	Oryza sativa	87.85	1.00e-169	588.00
IUUC-Pop-099278	Populus trichocarpa	72.31	7.00e-134	469.00
IUUC-Ppe-101860	Prunus persica	74.37	3.00e-142	497.00
IUUC-Sit-110657	Setaria italica	96.33	0.00e+00	657.00
IUUC-Sly-110867	Solanum lycopersicum	72.41	3.00e-140	490.00
IUUC-Sbi-114094	Sorghum bicolor	98.78	0.00e+00	666.00
IUUC-Tca-121499	Theobroma cacao	68.67	3.00e-139	488.00
IUUC-Tae-124058	Triticum aestivum	87.31	7.00e-171	592.00
IUUC-Tur-126512	Triticum urartu	87.64	1.00e-145	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence