iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052096

Ensembl Protein ID

ENSLOCP00000012132.1

UniProt Accession

W5MUS3; W5MUS3_LEPOC

Genbank Protein ID

ENSLOCP00000012132

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01001164

Gene Name

WDR1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000009921.1	ENSLOCT00000012153.1	ENSLOCP00000012132.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-31	106.8	190	226
UBD/Beta-Prp	8.40e-54	182.9	56	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H+  v+c++f +d ++ +s++ Dg+i ++D +tg +l
   Q: 190  HSRFVNCVRFsPDgNRCASAGADGQIFLYDGKTGEKL 226
           8888*******999****************9998765 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvh 88
            ++h +++t+ k++p++ ++a+g  +g++++wd+t++  + ++  +  +++++++ + +d+k l+ ++e     +++ +wd  tg+ v 
   Q: 56   YTEHAHQVTVAKYAPSGFYIASGDISGKVRIWDTTQKEHILKYeyQPFSGKIKDIAWTEDSKRLAIVGEGrekfGAVILWD--TGSSVG 142
           5678999*****************************999777743556889****************99999888899987..89**** PP
   S: 89   tlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl. 175
            ++gh++ + s+++ +++ ++lv+Gs+d+ +  ++ +  +    t + h+++vncv+++pdgn ++s+++D+++ l+d ktg+ l  l 
   Q: 143  EITGHNKIINSVDIKQTRpYRLVTGSDDNCAAFFEGPPFKFKF-TMADHSRFVNCVRFSPDGNRCASAGADGQIFLYDGKTGEKLAALg 230
           ****************999******************999999.********************************************9 PP
   S: 176  .tgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
             ++h++ +y +s+    ++++ ++ d++  lw++ +
   Q: 231  gGKAHDGGIYAVSVGNCFNFMLKAAADKRYFLWNILE 267
           9556************99***********99999865 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

ARMSYELKKV FASLPQVERG VSKILGGDPK GKNFIYTNGK SVTIRNIDNP AIADIYTEHA 60
HQVTVAKYAP SGFYIASGDI SGKVRIWDTT QKEHILKYEY QPFSGKIKDI AWTEDSKRLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTTATT GCAAAATATA CTTGTGTGCT CGGCAATGTT AGGAGTAATC TCATTAGCGG 60
AAAGTGGATT TCAGAAATGC TTTTTAAATT CAAAGATTAG TGGAGCGGAA TGTTTTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	30.74	6.00e-64	238.00
IUUC-Aml-002368	Ailuropoda melanoleuca	72.18	0.00e+00	911.00
IUUC-Atr-003160	Amborella trichopoda	35.58	2.00e-103	370.00
IUUC-Apl-004012	Anas platyrhynchos	72.49	0.00e+00	901.00
IUUC-Aca-004707	Anolis carolinensis	69.85	0.00e+00	892.00
IUUC-Aly-006465	Arabidopsis lyrata	34.66	4.00e-95	342.00
IUUC-Ath-006740	Arabidopsis thaliana	34.39	2.00e-94	339.00
IUUC-Ago-007920	Ashbya gossypii	26.77	2.00e-60	226.00
IUUC-Acl-008262	Aspergillus clavatus	32.52	9.00e-91	327.00
IUUC-Afl-008471	Aspergillus flavus	44.53	1.00e-55	211.00
IUUC-Afu-008989	Aspergillus fumigatus	32.22	2.00e-78	286.00
IUUC-Ani-009167	Aspergillus nidulans	33.98	5.00e-96	345.00
IUUC-Ang-009595	Aspergillus niger	34.18	2.00e-87	316.00
IUUC-Aor-009908	Aspergillus oryzae	33.05	8.00e-90	324.00
IUUC-Ate-010580	Aspergillus terreus	33.12	3.00e-90	327.00
IUUC-Ame-011269	Astyanax mexicanus	58.77	2.00e-132	465.00
IUUC-Bgr-011996	Blumeria graminis	32.69	2.00e-92	333.00
IUUC-Bta-013278	Bos taurus	71.92	0.00e+00	941.00
IUUC-Bci-013925	Botrytis cinerea	33.39	6.00e-93	335.00
IUUC-Bdi-014659	Brachypodium distachyon	32.37	1.00e-86	313.00
IUUC-Bol-016043	Brassica oleracea	31.49	3.00e-89	322.00
IUUC-Bra-017139	Brassica rapa	33.28	2.00e-93	336.00
IUUC-Cel-018241	Caenorhabditis elegans	36.44	9.00e-107	380.00
IUUC-Cja-019952	Callithrix jacchus	71.52	0.00e+00	895.00
IUUC-Cfa-020225	Canis familiaris	72.08	0.00e+00	919.00
IUUC-Cpo-021900	Cavia porcellus	71.69	0.00e+00	908.00
IUUC-Csa-023028	Chlorocebus sabaeus	72.08	0.00e+00	896.00
IUUC-Cho-025030	Choloepus hoffmanni	55.70	2.00e-177	615.00
IUUC-Cin-025152	Ciona intestinalis	52.47	8.00e-77	279.00
IUUC-Csv-025986	Ciona savignyi	31.38	8.00e-65	241.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	34.14	5.00e-92	331.00
IUUC-Cne-026814	Cryptococcus neoformans	32.22	7.00e-85	308.00
IUUC-Dre-027498	Danio rerio	83.59	2.00e-97	347.00
IUUC-Dno-029383	Dasypus novemcinctus	70.94	0.00e+00	884.00
IUUC-Dor-030633	Dipodomys ordii	69.53	0.00e+00	825.00
IUUC-Dse-031526	Dothistroma septosporum	33.81	2.00e-94	339.00
IUUC-Dme-031597	Drosophila melanogaster	42.93	6.00e-144	504.00
IUUC-Ete-032780	Echinops telfairi	63.06	0.00e+00	791.00
IUUC-Eca-034306	Equus caballus	70.70	0.00e+00	877.00
IUUC-Eeu-034531	Erinaceus europaeus	49.24	2.00e-86	313.00
IUUC-Fca-036301	Felis catus	71.69	0.00e+00	931.00
IUUC-Fal-037361	Ficedula albicollis	72.85	0.00e+00	945.00
IUUC-Fox-037924	Fusarium oxysporum	33.71	4.00e-88	318.00
IUUC-Fso-038199	Fusarium solani	32.69	2.00e-84	306.00
IUUC-Gmo-039238	Gadus morhua	65.96	0.00e+00	802.00
IUUC-Ggr-039830	Gaeumannomyces graminis	31.40	3.00e-79	289.00
IUUC-Gga-040235	Gallus gallus	73.26	0.00e+00	922.00
IUUC-Gac-042363	Gasterosteus aculeatus	67.26	0.00e+00	835.00
IUUC-Gma-042924	Glycine max	35.29	9.00e-104	370.00
IUUC-Ggo-044632	Gorilla gorilla	69.85	0.00e+00	863.00
IUUC-Hsa-045792	Homo sapiens	71.92	0.00e+00	918.00
IUUC-Hvu-047517	Hordeum vulgare	32.32	3.00e-92	332.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	71.96	0.00e+00	910.00
IUUC-Kpa-049183	Komagataella pastoris	32.42	9.00e-79	287.00
IUUC-Lch-050428	Latimeria chalumnae	69.53	0.00e+00	893.00
IUUC-Lpe-051306	Leersia perrieri	33.82	7.00e-96	344.00
IUUC-Lma-053313	Leptosphaeria maculans	36.33	4.00e-101	364.00
IUUC-Laf-054060	Loxodonta africana	69.90	0.00e+00	886.00
IUUC-Mcc-055619	Macaca mulatta	70.85	0.00e+00	870.00
IUUC-Meu-056689	Macropus eugenii	57.60	5.00e-129	454.00
IUUC-Mor-056940	Magnaporthe oryzae	31.88	3.00e-81	296.00
IUUC-Mpo-057557	Magnaporthe poae	27.86	5.00e-58	218.00
IUUC-Mtr-057922	Medicago truncatula	34.62	2.00e-99	356.00
IUUC-Mla-059103	Melampsora laricipopulina	32.24	4.00e-67	249.00
IUUC-Mga-060150	Meleagris gallopavo	72.80	0.00e+00	913.00
IUUC-Mvi-060448	Microbotryum violaceum	30.21	3.00e-63	236.00
IUUC-Mmr-061226	Microcebus murinus	70.45	0.00e+00	885.00
IUUC-Mdo-062674	Monodelphis domestica	71.27	0.00e+00	915.00
IUUC-Mmu-064170	Mus musculus	72.40	0.00e+00	917.00
IUUC-Mac-065124	Musa acuminata	35.29	5.00e-100	358.00
IUUC-Mpu-066001	Mustela putorius furo	69.33	0.00e+00	898.00
IUUC-Mlu-067253	Myotis lucifugus	71.19	0.00e+00	910.00
IUUC-Nfi-068550	Neosartorya fischeri	32.86	2.00e-92	333.00
IUUC-Ncr-068948	Neurospora crassa	32.75	2.00e-91	329.00
IUUC-Nle-070115	Nomascus leucogenys	68.59	0.00e+00	806.00
IUUC-Opr-070254	Ochotona princeps	69.84	0.00e+00	846.00
IUUC-Ont-071666	Oreochromis niloticus	70.45	0.00e+00	874.00
IUUC-Oan-073594	Ornithorhynchus anatinus	67.06	1.00e-121	429.00
IUUC-Ocu-074824	Oryctolagus cuniculus	70.29	0.00e+00	866.00
IUUC-Oba-075010	Oryza barthii	33.12	3.00e-94	339.00
IUUC-Obr-076364	Oryza brachyantha	33.77	9.00e-97	347.00
IUUC-Ogl-077019	Oryza glaberrima	33.12	3.00e-94	339.00
IUUC-Ogu-078496	Oryza glumaepatula	33.12	3.00e-94	339.00
IUUC-Oin-080116	Oryza indica	32.95	7.00e-94	337.00
IUUC-Olo-080290	Oryza longistaminata	33.12	5.00e-94	338.00
IUUC-Ome-081969	Oryza meridionalis	33.12	2.00e-94	339.00
IUUC-Oni-082075	Oryza nivara	33.12	2.00e-94	340.00
IUUC-Opu-083959	Oryza punctata	33.44	4.00e-95	342.00
IUUC-Oru-084711	Oryza rufipogon	33.12	3.00e-94	339.00
IUUC-Osa-085958	Oryza sativa	32.95	7.00e-94	337.00
IUUC-Ola-086968	Oryzias latipes	68.72	0.00e+00	857.00
IUUC-Oga-089108	Otolemur garnettii	71.11	0.00e+00	937.00
IUUC-Oar-089986	Ovis aries	66.45	0.00e+00	847.00
IUUC-Ptr-091281	Pan troglodytes	72.30	0.00e+00	913.00
IUUC-Pan-092585	Papio anubis	72.24	0.00e+00	898.00
IUUC-Psi-093811	Pelodiscus sinensis	71.57	0.00e+00	932.00
IUUC-Pma-094396	Petromyzon marinus	62.50	0.00e+00	806.00
IUUC-Pno-095086	Phaeosphaeria nodorum	34.06	2.00e-93	336.00
IUUC-Ppa-095876	Physcomitrella patens	32.47	8.00e-90	324.00
IUUC-Pfo-096973	Poecilia formosa	70.13	0.00e+00	909.00
IUUC-Pab-098391	Pongo abelii	71.75	0.00e+00	894.00
IUUC-Pop-098850	Populus trichocarpa	34.98	8.00e-100	357.00
IUUC-Pca-100257	Procavia capensis	47.21	8.00e-71	261.00
IUUC-Ppe-101578	Prunus persica	35.85	3.00e-101	362.00
IUUC-Pva-102872	Pteropus vampyrus	67.91	0.00e+00	873.00
IUUC-Pgr-103593	Puccinia graminis	32.35	6.00e-73	268.00
IUUC-Pte-104365	Pyrenophora teres	35.26	3.00e-93	336.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	34.78	9.00e-97	347.00
IUUC-Rno-105737	Rattus norvegicus	73.05	0.00e+00	947.00
IUUC-Sce-106383	Saccharomyces cerevisiae	27.51	1.00e-60	228.00
IUUC-Sha-107084	Sarcophilus harrisii	69.00	0.00e+00	792.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	33.23	5.00e-94	338.00
IUUC-Spo-108309	Schizosaccharomyces pombe	29.61	9.00e-84	304.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	32.74	5.00e-92	332.00
IUUC-Smo-109255	Selaginella moellendorffii	32.69	7.00e-88	318.00
IUUC-Sit-109962	Setaria italica	33.49	2.00e-94	339.00
IUUC-Sly-110897	Solanum lycopersicum	33.91	2.00e-96	346.00
IUUC-Stu-111971	Solanum tuberosum	34.82	2.00e-97	349.00
IUUC-Sar-113415	Sorex araneus	65.69	2.00e-80	292.00
IUUC-Sbi-114857	Sorghum bicolor	33.28	5.00e-94	338.00
IUUC-Sre-114900	Sporisorium reilianum	32.05	1.00e-80	294.00
IUUC-Tgu-117256	Taeniopygia guttata	73.20	0.00e+00	946.00
IUUC-Tru-117871	Takifugu rubripes	64.76	0.00e+00	808.00
IUUC-Tsy-119172	Tarsius syrichta	67.07	2.00e-94	339.00
IUUC-Tni-120339	Tetraodon nigroviridis	63.75	0.00e+00	830.00
IUUC-Tca-121609	Theobroma cacao	34.46	1.00e-96	347.00
IUUC-Tre-122076	Trichoderma reesei	34.31	5.00e-82	298.00
IUUC-Tvi-122528	Trichoderma virens	33.81	2.00e-82	300.00
IUUC-Tae-124549	Triticum aestivum	32.27	1.00e-91	330.00
IUUC-Tur-126845	Triticum urartu	31.01	2.00e-63	236.00
IUUC-Tme-127217	Tuber melanosporum	32.45	2.00e-86	313.00
IUUC-Tbe-127526	Tupaia belangeri	68.73	0.00e+00	877.00
IUUC-Ttr-128898	Tursiops truncatus	65.32	0.00e+00	834.00
IUUC-Uma-129631	Ustilago maydis	29.90	6.00e-79	288.00
IUUC-Vda-129732	Verticillium dahliae	32.18	7.00e-79	288.00
IUUC-Vvi-131217	Vitis vinifera	35.92	9.00e-100	357.00
IUUC-Xtr-132860	Xenopus tropicalis	64.53	0.00e+00	818.00
IUUC-Xma-133830	Xiphophorus maculatus	70.29	0.00e+00	910.00
IUUC-Yli-134335	Yarrowia lipolytica	28.64	2.00e-60	226.00
IUUC-Zma-135907	Zea mays	33.12	9.00e-93	334.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence