iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114139

Ensembl Protein ID

Sb06g032670.1

UniProt Accession

C5YAG1; C5YAG1_SORBI

Genbank Protein ID

EES13086.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G264000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g032670	Sb06g032670.1	Sb06g032670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-06	28.3	101	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikv 27
           Ht+ +++++f  d  ++ s+sdDgt+ +
   Q: 101  HTATINDISFdGDgEYIGSCSDDGTVTI 128
           **********9667************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTGRARGAQ LPLQNGAGVD DGDDEREEEE VGDDEEEEDE EEEEEPRLKY QRLGGSVPAI 60
LSTDAAAAIA VADRMVALGT HNGTLHILDF QGNQVKEIAA HTATINDISF DGDGEYIGSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCGATCAT TCACTCGACT AGTTTAAGGC GTTCACGACA AATTGATAGA CGGGCACCGA 60
AACAAAAGCA ATTTTTACAC GCAGGTCCTC GGCTTCGCCG GAAATCGTCT CGGAACGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00637--Clathrin

SMART

SM00299--CLH
SM00320--WD40

Gene Ontology

GO:0033263--C:CORVET complex
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0051020--F:GTPase binding
GO:0009630--P:gravitropism
GO:0006623--P:protein targeting to vacuole
GO:0035542--P:regulation of SNARE complex assembly
GO:0042144--P:vacuole fusion, non-autophagic
GO:0016192--P:vesicle-mediated transport

KEGG

sbi:SORBI_06g032670

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	86.48	0.00e+00	1505.00
IUUC-Aml-001435	Ailuropoda melanoleuca	36.96	5.00e-153	534.00
IUUC-Atr-002975	Amborella trichopoda	69.27	0.00e+00	1261.00
IUUC-Apl-003254	Anas platyrhynchos	36.04	1.00e-147	516.00
IUUC-Aca-005067	Anolis carolinensis	35.97	4.00e-147	514.00
IUUC-Aly-005839	Arabidopsis lyrata	67.09	0.00e+00	1254.00
IUUC-Ath-006625	Arabidopsis thaliana	67.20	0.00e+00	1264.00
IUUC-Ago-007960	Ashbya gossypii	24.94	4.00e-63	235.00
IUUC-Acl-008174	Aspergillus clavatus	25.41	5.00e-42	166.00
IUUC-Afl-008524	Aspergillus flavus	26.23	6.00e-43	169.00
IUUC-Afu-009054	Aspergillus fumigatus	25.40	3.00e-47	183.00
IUUC-Ani-009250	Aspergillus nidulans	24.92	6.00e-43	169.00
IUUC-Ang-009665	Aspergillus niger	22.95	4.00e-49	189.00
IUUC-Aor-010230	Aspergillus oryzae	25.97	8.00e-46	178.00
IUUC-Ate-010464	Aspergillus terreus	23.34	9.00e-38	152.00
IUUC-Ame-011311	Astyanax mexicanus	35.64	3.00e-116	412.00
IUUC-Bgr-012099	Blumeria graminis	24.56	1.00e-44	174.00
IUUC-Bta-013327	Bos taurus	36.73	2.00e-152	531.00
IUUC-Bci-013660	Botrytis cinerea	25.33	7.00e-39	155.00
IUUC-Bdi-014641	Brachypodium distachyon	88.96	0.00e+00	1586.00
IUUC-Bol-015685	Brassica oleracea	67.42	0.00e+00	1264.00
IUUC-Bra-016918	Brassica rapa	66.60	0.00e+00	1254.00
IUUC-Cel-018385	Caenorhabditis elegans	24.67	2.00e-68	253.00
IUUC-Cja-018994	Callithrix jacchus	37.11	1.00e-151	530.00
IUUC-Cfa-020405	Canis familiaris	37.30	7.00e-153	533.00
IUUC-Cpo-022163	Cavia porcellus	37.07	2.00e-152	531.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	27.14	1.00e-35	144.00
IUUC-Csa-023134	Chlorocebus sabaeus	37.41	3.00e-153	535.00
IUUC-Cho-024913	Choloepus hoffmanni	35.92	3.00e-98	352.00
IUUC-Cin-025239	Ciona intestinalis	36.73	5.00e-139	487.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	22.65	6.00e-42	166.00
IUUC-Cne-026799	Cryptococcus neoformans	34.99	1.00e-151	530.00
IUUC-Cme-027200	Cyanidioschyzon merolae	26.32	2.00e-09	57.00
IUUC-Dre-028115	Danio rerio	35.70	5.00e-147	514.00
IUUC-Dor-030947	Dipodomys ordii	37.76	5.00e-143	501.00
IUUC-Dse-031544	Dothistroma septosporum	26.02	9.00e-45	175.00
IUUC-Dme-031830	Drosophila melanogaster	29.75	1.00e-97	350.00
IUUC-Ete-033051	Echinops telfairi	37.35	4.00e-41	162.00
IUUC-Eca-033501	Equus caballus	37.19	2.00e-153	535.00
IUUC-Eeu-034555	Erinaceus europaeus	34.34	2.00e-77	282.00
IUUC-Fca-035809	Felis catus	37.19	3.00e-152	531.00
IUUC-Fal-037056	Ficedula albicollis	36.04	2.00e-147	515.00
IUUC-Fox-037949	Fusarium oxysporum	25.82	9.00e-45	175.00
IUUC-Fso-038282	Fusarium solani	25.57	2.00e-41	164.00
IUUC-Gmo-038540	Gadus morhua	35.78	1.00e-141	496.00
IUUC-Ggr-039733	Gaeumannomyces graminis	25.69	7.00e-41	162.00
IUUC-Gga-040446	Gallus gallus	35.70	2.00e-146	512.00
IUUC-Gac-041462	Gasterosteus aculeatus	35.75	3.00e-143	501.00
IUUC-Gma-043148	Glycine max	69.56	0.00e+00	1316.00
IUUC-Hsa-047030	Homo sapiens	37.19	3.00e-153	535.00
IUUC-Hvu-047693	Hordeum vulgare	88.18	0.00e+00	1580.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	37.41	2.00e-154	539.00
IUUC-Kpa-049224	Komagataella pastoris	24.70	7.00e-60	225.00
IUUC-Lch-049444	Latimeria chalumnae	36.06	5.00e-148	517.00
IUUC-Lpe-050942	Leersia perrieri	85.08	0.00e+00	1513.00
IUUC-Loc-052260	Lepisosteus oculatus	36.23	1.00e-147	516.00
IUUC-Lma-053173	Leptosphaeria maculans	24.06	1.00e-39	158.00
IUUC-Laf-054185	Loxodonta africana	37.30	2.00e-153	535.00
IUUC-Mcc-054816	Macaca mulatta	37.30	3.00e-153	535.00
IUUC-Meu-056483	Macropus eugenii	36.12	5.00e-43	169.00
IUUC-Mor-056979	Magnaporthe oryzae	24.39	2.00e-45	177.00
IUUC-Mpo-057312	Magnaporthe poae	25.48	7.00e-41	162.00
IUUC-Mtr-057630	Medicago truncatula	68.80	0.00e+00	1305.00
IUUC-Mla-058930	Melampsora laricipopulina	36.07	6.00e-33	132.00
IUUC-Mga-059942	Meleagris gallopavo	35.58	1.00e-144	506.00
IUUC-Mvi-060386	Microbotryum violaceum	37.93	4.00e-155	541.00
IUUC-Mmr-060640	Microcebus murinus	36.96	1.00e-152	533.00
IUUC-Mdo-062934	Monodelphis domestica	32.99	3.00e-120	425.00
IUUC-Mmu-063488	Mus musculus	36.96	6.00e-153	533.00
IUUC-Mac-064975	Musa acuminata	75.28	0.00e+00	1357.00
IUUC-Mpu-065777	Mustela putorius furo	37.19	4.00e-153	534.00
IUUC-Mlu-068052	Myotis lucifugus	36.96	3.00e-153	534.00
IUUC-Nfi-068436	Neosartorya fischeri	24.64	4.00e-49	189.00
IUUC-Ncr-068840	Neurospora crassa	26.68	5.00e-42	166.00
IUUC-Nle-070063	Nomascus leucogenys	36.96	3.00e-150	525.00
IUUC-Opr-070385	Ochotona princeps	37.82	7.00e-70	258.00
IUUC-Ont-072367	Oreochromis niloticus	35.56	3.00e-142	498.00
IUUC-Oan-073085	Ornithorhynchus anatinus	36.11	2.00e-143	501.00
IUUC-Ocu-074672	Oryctolagus cuniculus	36.96	2.00e-152	532.00
IUUC-Oba-075574	Oryza barthii	88.99	0.00e+00	1644.00
IUUC-Obr-076203	Oryza brachyantha	89.93	0.00e+00	1585.00
IUUC-Ogl-077909	Oryza glaberrima	88.99	0.00e+00	1644.00
IUUC-Ogu-078053	Oryza glumaepatula	90.50	0.00e+00	1637.00
IUUC-Oin-079700	Oryza indica	91.17	0.00e+00	1639.00
IUUC-Olo-080707	Oryza longistaminata	86.23	0.00e+00	1564.00
IUUC-Oni-082754	Oryza nivara	91.16	0.00e+00	1640.00
IUUC-Opu-083854	Oryza punctata	91.16	0.00e+00	1605.00
IUUC-Oru-085071	Oryza rufipogon	88.07	0.00e+00	1637.00
IUUC-Osa-085370	Oryza sativa	89.19	0.00e+00	1645.00
IUUC-Ola-086362	Oryzias latipes	36.32	8.00e-144	503.00
IUUC-Oga-088078	Otolemur garnettii	36.52	2.00e-148	518.00
IUUC-Oar-089679	Ovis aries	36.73	2.00e-152	531.00
IUUC-Ptr-091680	Pan troglodytes	37.19	3.00e-153	535.00
IUUC-Pan-092816	Papio anubis	36.88	2.00e-102	365.00
IUUC-Psi-093890	Pelodiscus sinensis	36.38	2.00e-148	519.00
IUUC-Pma-094654	Petromyzon marinus	38.33	3.00e-156	545.00
IUUC-Pno-095071	Phaeosphaeria nodorum	24.82	9.00e-43	168.00
IUUC-Ppa-095198	Physcomitrella patens	54.10	0.00e+00	952.00
IUUC-Pfo-097465	Poecilia formosa	36.78	2.00e-148	518.00
IUUC-Pab-098686	Pongo abelii	37.19	1.00e-153	536.00
IUUC-Pop-100066	Populus trichocarpa	71.16	0.00e+00	1335.00
IUUC-Pca-100990	Procavia capensis	34.02	5.00e-127	447.00
IUUC-Ppe-101500	Prunus persica	71.16	0.00e+00	1329.00
IUUC-Pva-102809	Pteropus vampyrus	36.96	3.00e-153	535.00
IUUC-Pgr-103404	Puccinia graminis	32.79	3.00e-134	472.00
IUUC-Ptt-103952	Puccinia triticina	32.26	7.00e-128	451.00
IUUC-Pte-104216	Pyrenophora teres	24.96	1.00e-41	164.00
IUUC-Rno-105949	Rattus norvegicus	38.13	1.00e-145	509.00
IUUC-Sce-106462	Saccharomyces cerevisiae	23.94	2.00e-52	200.00
IUUC-Sha-106689	Sarcophilus harrisii	35.70	1.00e-146	513.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	27.39	1.00e-82	300.00
IUUC-Spo-108173	Schizosaccharomyces pombe	28.80	2.00e-102	366.00
IUUC-Smo-109505	Selaginella moellendorffii	53.68	0.00e+00	902.00
IUUC-Sit-110176	Setaria italica	94.25	0.00e+00	1721.00
IUUC-Sly-111840	Solanum lycopersicum	68.61	0.00e+00	1316.00
IUUC-Sar-113073	Sorex araneus	33.75	7.00e-114	404.00
IUUC-Sre-115158	Sporisorium reilianum	36.62	4.00e-141	495.00
IUUC-Ssc-115894	Sus scrofa	36.61	7.00e-152	530.00
IUUC-Tgu-117481	Taeniopygia guttata	36.04	1.00e-148	520.00
IUUC-Tru-118468	Takifugu rubripes	35.67	6.00e-145	507.00
IUUC-Tni-120478	Tetraodon nigroviridis	35.79	1.00e-145	509.00
IUUC-Tca-121780	Theobroma cacao	70.54	0.00e+00	1345.00
IUUC-Tre-121900	Trichoderma reesei	24.50	2.00e-41	164.00
IUUC-Tvi-122343	Trichoderma virens	24.76	2.00e-40	160.00
IUUC-Tae-122785	Triticum aestivum	88.74	0.00e+00	1589.00
IUUC-Tur-126430	Triticum urartu	88.90	0.00e+00	1539.00
IUUC-Tme-127007	Tuber melanosporum	25.04	2.00e-42	167.00
IUUC-Tbe-128073	Tupaia belangeri	36.36	1.00e-125	443.00
IUUC-Ttr-128879	Tursiops truncatus	36.54	1.00e-150	526.00
IUUC-Uma-129356	Ustilago maydis	34.76	1.00e-140	493.00
IUUC-Vda-129676	Verticillium dahliae	24.96	1.00e-38	155.00
IUUC-Vvi-131744	Vitis vinifera	71.21	0.00e+00	1343.00
IUUC-Xtr-132093	Xenopus tropicalis	37.76	2.00e-142	499.00
IUUC-Xma-133199	Xiphophorus maculatus	36.84	3.00e-146	511.00
IUUC-Yli-134385	Yarrowia lipolytica	28.49	3.00e-73	269.00
IUUC-Zma-135567	Zea mays	97.14	0.00e+00	1724.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence