iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109544

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377571

Gene Name

SELMODRAFT_84906

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_84906	EFJ33043	EFJ33043

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-21	73.9	16	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ v++la+ ++  ll+sGsdD  + vWD+ t +ll+s
   Q: 16   GHNGCVNSLAWnTTgSLLLSGSDDTRVNVWDYNTRKLLQS 55
           8**********955699**************999988875 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEDTLQEFKD FCSSQGHNGC VNSLAWNTTG SLLLSGSDDT RVNVWDYNTR KLLQSVDSGH 60
IANIFCTKFL PASGDDIVVS GAGDSEVRIH RRSRVAATGS SEPFGLFRCH SKRVKKLAVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGATA CTTTGCAGGA ATTTAAAGAT TTTTGTTCTT CACAGGGTCA CAATGGATGT 60
GTGAATTCTT TGGCGTGGAA CACGACTGGT TCCTTGTTAC TCTCGGGCTC TGATGACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50293--TPR_REGION
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_84906

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008592	Aspergillus flavus	30.41	3.00e-29	123.00
IUUC-Ani-009263	Aspergillus nidulans	30.25	7.00e-31	129.00
IUUC-Ang-009671	Aspergillus niger	31.45	4.00e-31	130.00
IUUC-Aor-010229	Aspergillus oryzae	30.41	4.00e-29	122.00
IUUC-Ame-011849	Astyanax mexicanus	35.09	2.00e-38	153.00
IUUC-Cre-022659	Chlamydomonas reinhardtii	35.29	1.00e-32	134.00
IUUC-Csv-026289	Ciona savignyi	33.82	9.00e-51	194.00
IUUC-Cme-027316	Cyanidioschyzon merolae	31.43	1.00e-28	121.00
IUUC-Gma-042727	Glycine max	47.08	0.00e+00	645.00
IUUC-Loc-052088	Lepisosteus oculatus	32.63	7.00e-48	184.00
IUUC-Osa-085550	Oryza sativa	59.21	4.00e-77	280.00
IUUC-Pop-098837	Populus trichocarpa	50.28	0.00e+00	687.00
IUUC-Pyt-104546	Pyrenophora triticirepentis	30.99	1.00e-29	124.00
IUUC-Spo-108129	Schizosaccharomyces pombe	31.56	1.00e-29	124.00
IUUC-Sit-110154	Setaria italica	50.00	0.00e+00	667.00
IUUC-Sly-111707	Solanum lycopersicum	49.86	0.00e+00	658.00
IUUC-Tsy-119374	Tarsius syrichta	39.25	3.00e-35	142.00
IUUC-Tme-126910	Tuber melanosporum	31.87	3.00e-24	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence