iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087149

Ensembl Protein ID

ENSORLP00000017604.1

UniProt Accession

H2MG73; H2MG73_ORYLA

Genbank Protein ID

ENSORLP00000017604

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04020317

Gene Name

cdc40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000014040.1	ENSORLT00000017605.1	ENSORLP00000017604.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-34	115.0	332	369
UBD/Beta-Prp	5.80e-47	160.6	281	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f ++ t ++s+++D  ik+WD  tg ++
   Q: 332  GHSKAVRDICFsNTgTQFLSAAYDRHIKLWDSETGQCI 369
           8**********9778*****************999986 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++  ++ cl+ t+ gh+++v+ ++++ +g  + s+++Dr ++lWd++tg++
   Q: 281  KQIHVWSGHTKGVSAIRLFPnSGHLLLSCSMDCKIKLWEVyGERRCLR-TFIGHSKAVRDICFSNTGTQFLSAAYDRHIKLWDSETGQC 368
           899*****************666****************935777888.**************************************** PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
           + ++t  + +  y+++f+++    + +v+g  d+++  wd++tge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  d
   Q: 369  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRTGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWewD 450
           ****8..588889***999988889*******************************************************9444 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSAAISSLAS YGSDSDSENE SESNTSTEQA DPMDSDAMVH LKPLQSGSIM SLAVLNSAPE 60
VAVKESVETG THLDPTLKEV SYNPTYETLF APEFGPKNPF QTQQMSAPRN MLSGYAEPAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGCCG CCATATCTTC CCTCGCTTCG TACGGTAGCG ATTCTGACTC AGAAAACGAG 60
TCAGAATCAA ATACTAGTAC AGAACAAGCT GACCCGATGG ACTCGGATGC AATGGTTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ola:101159962

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	48.96	2.00e-144	506.00
IUUC-Aml-002243	Ailuropoda melanoleuca	80.96	0.00e+00	680.00
IUUC-Atr-002502	Amborella trichopoda	49.91	3.00e-154	538.00
IUUC-Apl-003885	Anas platyrhynchos	85.69	0.00e+00	944.00
IUUC-Aca-004854	Anolis carolinensis	62.11	0.00e+00	671.00
IUUC-Aly-006158	Arabidopsis lyrata	49.66	9.00e-157	546.00
IUUC-Ath-007474	Arabidopsis thaliana	50.89	2.00e-157	548.00
IUUC-Ago-007726	Ashbya gossypii	36.92	4.00e-72	265.00
IUUC-Acl-008220	Aspergillus clavatus	43.32	4.00e-132	464.00
IUUC-Afl-008473	Aspergillus flavus	42.29	2.00e-130	459.00
IUUC-Afu-008773	Aspergillus fumigatus	43.42	1.00e-132	466.00
IUUC-Ani-009323	Aspergillus nidulans	42.66	5.00e-119	421.00
IUUC-Ang-009851	Aspergillus niger	42.21	2.00e-131	462.00
IUUC-Aor-009950	Aspergillus oryzae	42.29	2.00e-130	459.00
IUUC-Ate-010372	Aspergillus terreus	43.34	1.00e-132	466.00
IUUC-Ame-011660	Astyanax mexicanus	86.94	0.00e+00	1026.00
IUUC-Bgr-012230	Blumeria graminis	45.01	3.00e-128	451.00
IUUC-Bta-012568	Bos taurus	83.91	0.00e+00	947.00
IUUC-Bci-013646	Botrytis cinerea	44.42	4.00e-124	437.00
IUUC-Bdi-014199	Brachypodium distachyon	49.90	1.00e-145	509.00
IUUC-Bol-015695	Brassica oleracea	49.73	4.00e-162	564.00
IUUC-Bra-017923	Brassica rapa	50.00	4.00e-162	564.00
IUUC-Cel-018535	Caenorhabditis elegans	49.32	6.00e-176	610.00
IUUC-Cja-019071	Callithrix jacchus	84.07	0.00e+00	943.00
IUUC-Cfa-020559	Canis familiaris	83.91	0.00e+00	946.00
IUUC-Cpo-022356	Cavia porcellus	83.91	0.00e+00	943.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.61	2.00e-80	291.00
IUUC-Csa-023125	Chlorocebus sabaeus	83.91	0.00e+00	945.00
IUUC-Cho-024676	Choloepus hoffmanni	78.72	0.00e+00	848.00
IUUC-Cin-025229	Ciona intestinalis	68.12	0.00e+00	737.00
IUUC-Csv-025868	Ciona savignyi	73.12	4.00e-40	154.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.57	6.00e-109	387.00
IUUC-Cne-026885	Cryptococcus neoformans	50.18	7.00e-151	527.00
IUUC-Dre-027631	Danio rerio	87.78	0.00e+00	1055.00
IUUC-Dno-029815	Dasypus novemcinctus	76.27	0.00e+00	880.00
IUUC-Dor-031143	Dipodomys ordii	70.75	0.00e+00	777.00
IUUC-Dse-031520	Dothistroma septosporum	42.96	3.00e-99	355.00
IUUC-Dme-032050	Drosophila melanogaster	63.17	0.00e+00	743.00
IUUC-Ete-032866	Echinops telfairi	81.72	0.00e+00	920.00
IUUC-Eca-033384	Equus caballus	83.73	0.00e+00	941.00
IUUC-Eeu-034471	Erinaceus europaeus	70.75	0.00e+00	714.00
IUUC-Fca-035727	Felis catus	84.10	0.00e+00	949.00
IUUC-Fal-036774	Ficedula albicollis	86.04	0.00e+00	952.00
IUUC-Fox-037951	Fusarium oxysporum	43.46	4.00e-128	451.00
IUUC-Fso-038287	Fusarium solani	43.46	1.00e-125	442.00
IUUC-Gmo-039670	Gadus morhua	83.99	0.00e+00	1004.00
IUUC-Ggr-039764	Gaeumannomyces graminis	39.14	2.00e-115	409.00
IUUC-Gga-040293	Gallus gallus	86.87	0.00e+00	956.00
IUUC-Gac-042159	Gasterosteus aculeatus	85.93	0.00e+00	1063.00
IUUC-Gma-044299	Glycine max	64.22	1.00e-138	486.00
IUUC-Ggo-044864	Gorilla gorilla	84.10	0.00e+00	946.00
IUUC-Hsa-046602	Homo sapiens	84.10	0.00e+00	946.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	88.52	0.00e+00	749.00
IUUC-Kpa-049318	Komagataella pastoris	45.11	1.00e-97	350.00
IUUC-Lch-049796	Latimeria chalumnae	72.89	0.00e+00	822.00
IUUC-Lpe-051153	Leersia perrieri	51.63	8.00e-149	520.00
IUUC-Loc-052467	Lepisosteus oculatus	88.87	0.00e+00	1022.00
IUUC-Lma-053107	Leptosphaeria maculans	46.88	2.00e-114	405.00
IUUC-Laf-053787	Loxodonta africana	83.42	0.00e+00	967.00
IUUC-Mcc-055706	Macaca mulatta	83.91	0.00e+00	945.00
IUUC-Meu-056757	Macropus eugenii	85.37	3.00e-170	591.00
IUUC-Mor-057079	Magnaporthe oryzae	38.97	1.00e-114	406.00
IUUC-Mpo-057533	Magnaporthe poae	50.14	5.00e-112	397.00
IUUC-Mtr-057950	Medicago truncatula	48.96	2.00e-148	518.00
IUUC-Mla-058910	Melampsora laricipopulina	46.70	3.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	85.90	0.00e+00	954.00
IUUC-Mvi-060349	Microbotryum violaceum	58.69	1.00e-138	486.00
IUUC-Mmr-061209	Microcebus murinus	83.55	0.00e+00	971.00
IUUC-Mdo-062118	Monodelphis domestica	83.18	0.00e+00	974.00
IUUC-Mmu-063173	Mus musculus	83.91	0.00e+00	947.00
IUUC-Mac-065080	Musa acuminata	51.17	3.00e-153	535.00
IUUC-Mpu-066659	Mustela putorius furo	83.91	0.00e+00	948.00
IUUC-Mlu-067029	Myotis lucifugus	83.91	0.00e+00	931.00
IUUC-Nfi-068334	Neosartorya fischeri	44.30	3.00e-133	468.00
IUUC-Ncr-068675	Neurospora crassa	37.63	6.00e-103	367.00
IUUC-Nle-070113	Nomascus leucogenys	80.03	0.00e+00	941.00
IUUC-Opr-070685	Ochotona princeps	76.97	0.00e+00	897.00
IUUC-Ont-071680	Oreochromis niloticus	88.98	0.00e+00	1064.00
IUUC-Oan-073573	Ornithorhynchus anatinus	86.69	0.00e+00	883.00
IUUC-Ocu-074074	Oryctolagus cuniculus	83.36	0.00e+00	967.00
IUUC-Oba-075625	Oryza barthii	51.72	2.00e-148	519.00
IUUC-Obr-076510	Oryza brachyantha	50.29	9.00e-148	516.00
IUUC-Ogl-077275	Oryza glaberrima	51.72	2.00e-148	519.00
IUUC-Ogu-078563	Oryza glumaepatula	51.72	2.00e-148	519.00
IUUC-Oin-079898	Oryza indica	62.87	3.00e-134	471.00
IUUC-Olo-081080	Oryza longistaminata	51.92	8.00e-141	493.00
IUUC-Oni-083121	Oryza nivara	51.72	2.00e-148	519.00
IUUC-Opu-083329	Oryza punctata	51.63	8.00e-148	516.00
IUUC-Oru-084807	Oryza rufipogon	51.48	3.00e-131	461.00
IUUC-Osa-086039	Oryza sativa	51.82	4.00e-149	521.00
IUUC-Olu-087627	Ostreococcus lucimarinus	44.25	2.00e-120	426.00
IUUC-Oga-088359	Otolemur garnettii	83.73	0.00e+00	945.00
IUUC-Oar-089390	Ovis aries	83.91	0.00e+00	945.00
IUUC-Ptr-090894	Pan troglodytes	84.10	0.00e+00	946.00
IUUC-Pan-092476	Papio anubis	83.91	0.00e+00	945.00
IUUC-Psi-093527	Pelodiscus sinensis	82.53	0.00e+00	899.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.76	5.00e-114	404.00
IUUC-Ppa-095386	Physcomitrella patens	49.81	5.00e-154	537.00
IUUC-Pfo-096139	Poecilia formosa	90.36	0.00e+00	1071.00
IUUC-Pab-097838	Pongo abelii	83.40	0.00e+00	833.00
IUUC-Pop-099962	Populus trichocarpa	51.42	1.00e-155	542.00
IUUC-Pca-100876	Procavia capensis	70.57	0.00e+00	802.00
IUUC-Ppe-101777	Prunus persica	50.75	1.00e-151	529.00
IUUC-Pva-102418	Pteropus vampyrus	83.55	0.00e+00	945.00
IUUC-Pgr-103456	Puccinia graminis	50.55	5.00e-160	557.00
IUUC-Ptt-103731	Puccinia triticina	47.35	7.00e-149	520.00
IUUC-Pte-104386	Pyrenophora teres	50.50	2.00e-116	412.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.25	4.00e-116	411.00
IUUC-Rno-105694	Rattus norvegicus	79.34	0.00e+00	875.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.47	5.00e-78	284.00
IUUC-Sha-106709	Sarcophilus harrisii	83.36	0.00e+00	972.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	41.27	7.00e-125	440.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.75	1.00e-123	436.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	44.95	2.00e-116	412.00
IUUC-Smo-109326	Selaginella moellendorffii	44.61	4.00e-128	451.00
IUUC-Sit-110446	Setaria italica	51.43	7.00e-149	520.00
IUUC-Sly-111330	Solanum lycopersicum	49.73	2.00e-152	532.00
IUUC-Stu-112610	Solanum tuberosum	49.28	2.00e-152	532.00
IUUC-Sar-113065	Sorex araneus	62.79	2.00e-101	362.00
IUUC-Sbi-114005	Sorghum bicolor	51.43	8.00e-148	516.00
IUUC-Sre-114988	Sporisorium reilianum	49.91	2.00e-158	552.00
IUUC-Ssc-115760	Sus scrofa	83.91	0.00e+00	947.00
IUUC-Tgu-116493	Taeniopygia guttata	86.87	0.00e+00	960.00
IUUC-Tru-118489	Takifugu rubripes	86.23	0.00e+00	1038.00
IUUC-Tsy-119332	Tarsius syrichta	83.76	0.00e+00	968.00
IUUC-Tni-120202	Tetraodon nigroviridis	83.15	0.00e+00	944.00
IUUC-Tca-121429	Theobroma cacao	50.19	2.00e-151	528.00
IUUC-Tre-122162	Trichoderma reesei	43.38	4.00e-125	441.00
IUUC-Tvi-122500	Trichoderma virens	42.34	2.00e-123	436.00
IUUC-Tae-125557	Triticum aestivum	49.05	8.00e-144	503.00
IUUC-Tur-126554	Triticum urartu	48.94	1.00e-141	496.00
IUUC-Tme-126919	Tuber melanosporum	45.34	1.00e-137	483.00
IUUC-Tbe-127968	Tupaia belangeri	78.79	0.00e+00	900.00
IUUC-Ttr-129215	Tursiops truncatus	80.55	0.00e+00	949.00
IUUC-Uma-129622	Ustilago maydis	50.36	2.00e-163	569.00
IUUC-Vda-129750	Verticillium dahliae	44.15	4.00e-125	441.00
IUUC-Vpa-130617	Vicugna pacos	84.14	0.00e+00	885.00
IUUC-Vvi-131238	Vitis vinifera	47.37	7.00e-151	527.00
IUUC-Xtr-131865	Xenopus tropicalis	82.30	0.00e+00	976.00
IUUC-Xma-133627	Xiphophorus maculatus	89.85	0.00e+00	1069.00
IUUC-Yli-134390	Yarrowia lipolytica	45.76	2.00e-118	419.00
IUUC-Zma-135925	Zea mays	52.68	1.00e-144	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence