iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005816

Ensembl Protein ID

Al_scaffold_0001_58

UniProt Accession

D7KP83; D7KP83_ARALL

Genbank Protein ID

EFH65615.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

ATPUB54; ARALYDRAFT_677735

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0001_58	Al_scaffold_0001_58	Al_scaffold_0001_58

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-28	98.0	235	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +e+f+CpIs+e+MrdP+v+++G ty+++  +kwl+sgg+t+P+t++pl++++lvPn+tlr +i++w+e+n +
   Q: 235  LEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPMTNKPLENHNLVPNHTLRIIIKDWLEKNPN 306
           689*****************************************************************9975 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEDAIYVAVN QDVRESKKTL LWTLKNLQVK KIFLLHVHLP FSLTTSSSRF EQSEIDAIQD 60
SELNTSVNSL YKYRDICINK GGVNEEDVDT SLISGHDVGE GIVELMYQNN ITKLVMGAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGACG CCATTTATGT TGCAGTGAAT CAAGATGTTC GAGAAAGTAA AAAAACTTTG 60
TTATGGACAT TGAAAAATCT TCAAGTCAAG AAGATTTTCC TTCTTCATGT TCATCTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014729--Rossmann-like_a/b/a_fold
IPR003613--Ubox_domain
IPR006016--UspA
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF00582--Usp

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0006950--P:response to stress

KEGG

aly:ARALYDRAFT_677735

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007073	Arabidopsis thaliana	92.86	1.00e-161	561.00
IUUC-Bol-015460	Brassica oleracea	58.96	1.00e-93	335.00
IUUC-Bra-018104	Brassica rapa	60.59	2.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence