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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007645
Ensembl Protein ID AT1G03060.1
UniProt Accession F4HZB2; Q9SA64; BCHA1_ARATH
Genbank Protein ID AAD25803.1; AEE27523.1
Protein Name Protein SPIRRIG; BEACH domain-containing protein A1; BEACH-domain homolog A1
Genbank Nucleotide ID AC006550; CP002684
Gene Name SPI; BCHA1; At1g03060; F10O3.12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G03060 AT1G03060.4 AT1G03060.4
AT1G03060 AT1G03060.1 AT1G03060.1
AT1G03060 AT1G03060.2 AT1G03060.2
AT1G03060 AT1G03060.3 AT1G03060.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.80e-09 36.8 3379 3412
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           Ht++vtcl+   +  +++sGsdD+t+ +WDl++ 
   Q: 3379 HTAKVTCLRVsqPYMMIASGSDDCTVIIWDLSSL 3412
           **********855588**************9765 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Involved in cell morphogenesis (PubMed:19392685). May have a function in membrane fusion or membrane composition (PubMed:19392685). Required for salt stress tolerance (PubMed:26133670). Regulates the salt stress-dependent post-transcriptional stabilization, cytoplasmic agglomeration, and localization to P-bodies of a subset of salt stress-regulated mRNAs (PubMed:26133670).
 Involved in cell morphogenesis (PubMed:19392685). May have a function in membrane fusion or membrane composition (PubMed:19392685). Required for salt stress tolerance (PubMed:26133670). Regulates the salt stress-dependent post-transcriptional stabilization, cytoplasmic agglomeration, and localization to P-bodies of a subset of salt stress-regulated mRNAs (PubMed:26133670).
Protein Sequence
(Fasta)
MKWATLLKDI KEKVGLAQSS DSDPFPVDLT APPSSSSSSS SPSFTYPSSS SLHHFNFSPS 60
SRDNHELELD FKRLWEEFRS SSSEKEKEAA LNLTVDIFCR LVKRHANVDQ LVTMLVETHI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007645|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAAATGGG CAACATTGCT TAAGGACATC AAGGAGAAGG TTGGATTAGC TCAATCCTCT 60
GACTCCGACC CCTTTCCCGT TGACCTAACT GCTCCGCCCT CTTCTTCTTC TTCTTCCTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007645|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40
SMART

SM01026--Beach
SM00320--WD40
Gene Ontology

GO:0000932--C:P-body
GO:0071472--P:cellular response to salt stress
GO:0033962--P:cytoplasmic mRNA processing body assembly
GO:0009825--P:multidimensional cell growth
GO:1904580--P:regulation of intracellular mRNA localization
GO:0009737--P:response to abscisic acid
GO:0010090--P:trichome morphogenesis
GO:0007033--P:vacuole organization
KEGG ath:AT1G03060
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000317 Aegilops tauschii 64.34 0.00e+00 4412.00
IUUC-Aml-002094 Ailuropoda melanoleuca 32.53 4.00e-178 619.00
IUUC-Atr-002879 Amborella trichopoda 67.43 0.00e+00 4647.00
IUUC-Aca-005386 Anolis carolinensis 32.55 5.00e-175 609.00
IUUC-Aly-005640 Arabidopsis lyrata 97.34 0.00e+00 6895.00
IUUC-Afu-009064 Aspergillus fumigatus 37.23 2.00e-138 487.00
IUUC-Aor-010079 Aspergillus oryzae 39.15 5.00e-141 496.00
IUUC-Bta-012997 Bos taurus 32.46 7.00e-177 615.00
IUUC-Bdi-015031 Brachypodium distachyon 65.16 0.00e+00 4454.00
IUUC-Bol-015656 Brassica oleracea 91.94 0.00e+00 6468.00
IUUC-Bra-017449 Brassica rapa 91.38 0.00e+00 6380.00
IUUC-Cja-019272 Callithrix jacchus 32.46 8.00e-176 612.00
IUUC-Cfa-020073 Canis familiaris 32.46 1.00e-177 618.00
IUUC-Cpo-021455 Cavia porcellus 36.66 1.00e-177 618.00
IUUC-Csa-023097 Chlorocebus sabaeus 32.39 0.00e+00 629.00
IUUC-Cin-025176 Ciona intestinalis 26.07 3.00e-15 75.10
IUUC-Cgl-026670 Colletotrichum gloeosporioides 38.91 1.00e-120 428.00
IUUC-Dre-027703 Danio rerio 42.62 1.00e-169 592.00
IUUC-Dno-028965 Dasypus novemcinctus 39.51 1.00e-134 474.00
IUUC-Dor-031065 Dipodomys ordii 46.17 1.00e-90 329.00
IUUC-Eca-033575 Equus caballus 32.31 1.00e-177 618.00
IUUC-Fca-036304 Felis catus 32.36 4.00e-176 613.00
IUUC-Fal-037019 Ficedula albicollis 32.74 5.00e-176 613.00
IUUC-Gmo-039503 Gadus morhua 42.69 6.00e-169 589.00
IUUC-Ggr-039900 Gaeumannomyces graminis 35.73 2.00e-140 494.00
IUUC-Gga-041220 Gallus gallus 40.03 1.00e-141 498.00
IUUC-Gac-041618 Gasterosteus aculeatus 37.06 4.00e-173 603.00
IUUC-Gma-043242 Glycine max 74.27 0.00e+00 5167.00
IUUC-Ggo-044679 Gorilla gorilla 30.56 3.00e-161 563.00
IUUC-Hsa-046586 Homo sapiens 32.32 4.00e-180 626.00
IUUC-Hvu-047814 Hordeum vulgare 65.33 0.00e+00 4507.00
IUUC-Itr-048396 Ictidomys tridecemlineatus 32.53 1.00e-176 614.00
IUUC-Lch-049803 Latimeria chalumnae 39.88 2.00e-129 457.00
IUUC-Lpe-050828 Leersia perrieri 65.38 0.00e+00 4463.00
IUUC-Loc-052434 Lepisosteus oculatus 32.43 4.00e-174 606.00
IUUC-Lma-053017 Leptosphaeria maculans 30.72 8.00e-128 452.00
IUUC-Laf-054408 Loxodonta africana 31.84 7.00e-174 605.00
IUUC-Mcc-055652 Macaca mulatta 32.39 6.00e-177 615.00
IUUC-Mor-057120 Magnaporthe oryzae 37.42 2.00e-141 497.00
IUUC-Mtr-058732 Medicago truncatula 73.15 0.00e+00 5116.00
IUUC-Mmr-061760 Microcebus murinus 35.52 5.00e-157 549.00
IUUC-Mmu-063588 Mus musculus 32.74 0.00e+00 630.00
IUUC-Mac-064872 Musa acuminata 60.12 0.00e+00 2431.00
IUUC-Mpu-066073 Mustela putorius furo 32.46 3.00e-178 620.00
IUUC-Mlu-067641 Myotis lucifugus 32.57 1.00e-178 621.00
IUUC-Nfi-068471 Neosartorya fischeri 38.60 3.00e-142 500.00
IUUC-Nle-070009 Nomascus leucogenys 32.32 2.00e-180 627.00
IUUC-Opr-070689 Ochotona princeps 34.45 4.00e-150 526.00
IUUC-Ont-071427 Oreochromis niloticus 43.86 1.00e-172 601.00
IUUC-Oan-073118 Ornithorhynchus anatinus 29.41 2.00e-132 468.00
IUUC-Ocu-074702 Oryctolagus cuniculus 32.31 1.00e-176 615.00
IUUC-Oba-075831 Oryza barthii 65.86 0.00e+00 4524.00
IUUC-Obr-076728 Oryza brachyantha 66.01 0.00e+00 4535.00
IUUC-Ogl-077922 Oryza glaberrima 65.38 0.00e+00 4474.00
IUUC-Ogu-079001 Oryza glumaepatula 65.45 0.00e+00 4479.00
IUUC-Oin-079929 Oryza indica 76.18 0.00e+00 989.00
IUUC-Olo-080662 Oryza longistaminata 65.27 0.00e+00 4467.00
IUUC-Ome-081733 Oryza meridionalis 66.12 0.00e+00 4362.00
IUUC-Oni-082641 Oryza nivara 65.38 0.00e+00 4476.00
IUUC-Opu-083564 Oryza punctata 65.15 0.00e+00 4480.00
IUUC-Oru-084403 Oryza rufipogon 65.38 0.00e+00 4473.00
IUUC-Osa-085957 Oryza sativa 65.29 7.00e-147 512.00
IUUC-Ola-086856 Oryzias latipes 37.31 2.00e-173 604.00
IUUC-Oar-089625 Ovis aries 32.46 6.00e-177 616.00
IUUC-Ptr-091209 Pan troglodytes 32.32 2.00e-180 627.00
IUUC-Pan-092751 Papio anubis 32.46 1.00e-176 615.00
IUUC-Psi-092951 Pelodiscus sinensis 32.70 1.00e-178 621.00
IUUC-Ppa-095447 Physcomitrella patens 49.47 0.00e+00 3079.00
IUUC-Pfo-097102 Poecilia formosa 36.95 2.00e-173 604.00
IUUC-Pab-098485 Pongo abelii 32.32 1.00e-180 628.00
IUUC-Pop-099807 Populus trichocarpa 75.81 0.00e+00 5135.00
IUUC-Ppe-101277 Prunus persica 75.89 0.00e+00 5204.00
IUUC-Ptt-103873 Puccinia triticina 35.87 2.00e-103 371.00
IUUC-Rno-105592 Rattus norvegicus 32.26 2.00e-180 627.00
IUUC-Sha-106751 Sarcophilus harrisii 32.49 4.00e-179 623.00
IUUC-Spo-108108 Schizosaccharomyces pombe 34.11 8.00e-128 452.00
IUUC-Smo-109485 Selaginella moellendorffii 49.04 0.00e+00 3052.00
IUUC-Sit-110811 Setaria italica 65.54 0.00e+00 4209.00
IUUC-Sly-110936 Solanum lycopersicum 72.59 0.00e+00 4974.00
IUUC-Sbi-114421 Sorghum bicolor 63.94 0.00e+00 4353.00
IUUC-Sre-115137 Sporisorium reilianum 29.26 5.00e-115 409.00
IUUC-Ssc-116100 Sus scrofa 32.50 9.00e-178 618.00
IUUC-Tgu-117182 Taeniopygia guttata 32.67 1.00e-174 608.00
IUUC-Tru-117859 Takifugu rubripes 43.39 6.00e-172 599.00
IUUC-Tsy-119315 Tarsius syrichta 32.12 2.00e-172 600.00
IUUC-Tni-120784 Tetraodon nigroviridis 42.73 4.00e-167 583.00
IUUC-Tca-121423 Theobroma cacao 77.15 0.00e+00 5408.00
IUUC-Tvi-122476 Trichoderma virens 36.25 2.00e-130 461.00
IUUC-Tur-126221 Triticum urartu 64.41 0.00e+00 4350.00
IUUC-Tme-126944 Tuber melanosporum 37.60 1.00e-137 484.00
IUUC-Tbe-127827 Tupaia belangeri 33.14 3.00e-160 560.00
IUUC-Ttr-128368 Tursiops truncatus 32.53 4.00e-177 616.00
IUUC-Vda-129813 Verticillium dahliae 37.94 3.00e-131 463.00
IUUC-Vvi-131663 Vitis vinifera 76.92 0.00e+00 3591.00
IUUC-Xtr-132689 Xenopus tropicalis 31.63 1.00e-173 604.00
IUUC-Xma-133750 Xiphophorus maculatus 41.67 2.00e-135 478.00
IUUC-Zma-135580 Zea mays 64.59 0.00e+00 4426.00
Created Date 25-Jun-2017

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