iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006006

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Auxin signaling F-box 3

Genbank Nucleotide ID

GL348713

Gene Name

AFB3; ARALYDRAFT_888633

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_101427.1	scaffold_101427.1	scaffold_101427.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	97.40	0.00e+00	1107.00	IUUC-Ath-007194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KNVFIGNCYA INPERLIGRF 60
PCLKSLTLKG KPHFADFNLV PHEWGGFVLP WIEALARSRV GLEELRLKRM VVTDESLELL 120

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Nucleotide Sequence
(Fasta)

TCAGCAATCG ATAGAGGAAG ATGAATTATT TCCCAGACGA GGTCATAGAG CACGTGTTTG 60
ACTTCGTAGC TTCTCACAAA GACAGGAACT CGATCTCTCT GGTCTGCAAA TCATGGCACA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

aly:ARALYDRAFT_888633

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002877	Amborella trichopoda	66.43	0.00e+00	810.00
IUUC-Ath-007194	Arabidopsis thaliana	97.40	0.00e+00	1112.00
IUUC-Bol-016270	Brassica oleracea	86.85	0.00e+00	1035.00
IUUC-Bra-017683	Brassica rapa	88.04	0.00e+00	1021.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence