iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002737

Ensembl Protein ID

ERN16630

UniProt Accession

U5D326; U5D326_AMBTC

Genbank Protein ID

ERN16630.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392418

Gene Name

AMTR_s00051p00079490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00051p00079490	ERN16630	ERN16630

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-18	65.0	461	497
UBD/Beta-Prp	5.80e-52	177.2	418	758

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H+++v++laf  ++  l +++++dD++ikvWD  tg+
   Q: 461  HNGGVNDLAFshPNkQLcIITCGDDKSIKVWDAATGN 497
           9*********996643359*************88886 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.. 104
             ++ v +spd++l+ +++  + +  + ++ g+      ++  h+++v+++ fs+  k   ++t+++D+ ikvwd  tg   +t++ghe+ v+s+  +   
   Q: 418  VSVNRVMWSPDGTLFGVAYSKHIVHTYYYHGGDDlrpHLEIDAHNGGVNDLAFSHPNKqlCIITCGDDKSIKVWDAATGNKQYTFEGHEAPVYSVCPHYke 518
           556778899**********999999999999998455557799***********9988899*********************************8555443 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
           + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++    D+ +  W+ + g + rt  g  ++s   ++fd ++++++++++ 
   Q: 519  NIQFIFSTAVDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYNADGTRLFSCGTskdgDSYLVEWNESEGVVKRTYAGFRKRSLGVVQFDTTKNRFLAAGDE 618
           88***************99998777755555.569**********99999976343355566688899********99*********************** PP
   S: 202  gtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW.dlrsgdllktlqlhn.................ssvisvav.....lsfgdn 278
             vk+wd+ + + + ++ +    + s r   +++  l+ +s D+ i+i  + +   ll+tl+++                  +s++sv++     +++gd+
   Q: 619  FAVKFWDMDNVNPLISVDAEGGLPASPRIRfNKEGMLLAASTDNGIKILaNADGLRLLHTLENRSfdasrvnseavaksptiNSLTSVSAaggtsMGVGDR 719
           *********99999999999988888776645888899999*******77999999999999999999888888888888887777776644433333344 PP
   S: 279  vl.....................vlgsedskvniwklkk 296
           v                      ++ ++  k +iwkl++
   Q: 720  VApvvamvglngdnrsvgdvkprITDESMEKSKIWKLTE 758
           436667777777777777777777777777777777766 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDAVHNGEW DEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLESLDKQDR AKAVEILVKD LKVFSSFNED LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTC TGAGCAGGGA GCTGGTCTTT CTCATCCTAC AGTTCCTCGA TGAGGAGAAG 60
TTCAAGGAGA CTGTTCACAA GTGAGTATTC ATGCTCTTGT TTTTCTCGCT TGTCTGGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

atr:18444945

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	76.46	0.00e+00	1777.00
IUUC-Aly-005995	Arabidopsis lyrata	75.85	0.00e+00	1738.00
IUUC-Ath-007021	Arabidopsis thaliana	76.09	0.00e+00	1747.00
IUUC-Bdi-014914	Brachypodium distachyon	76.51	0.00e+00	1746.00
IUUC-Bol-016225	Brassica oleracea	76.81	0.00e+00	1763.00
IUUC-Bra-016893	Brassica rapa	76.50	0.00e+00	1724.00
IUUC-Gma-043911	Glycine max	79.70	0.00e+00	1798.00
IUUC-Hvu-047688	Hordeum vulgare	78.01	0.00e+00	1693.00
IUUC-Lpe-051514	Leersia perrieri	75.00	0.00e+00	1666.00
IUUC-Mtr-058586	Medicago truncatula	79.07	0.00e+00	1794.00
IUUC-Mac-065382	Musa acuminata	77.94	0.00e+00	1808.00
IUUC-Oba-075912	Oryza barthii	78.12	0.00e+00	1747.00
IUUC-Obr-076921	Oryza brachyantha	76.84	0.00e+00	1750.00
IUUC-Ogl-077334	Oryza glaberrima	77.21	0.00e+00	1754.00
IUUC-Ogu-078494	Oryza glumaepatula	77.21	0.00e+00	1754.00
IUUC-Oin-079720	Oryza indica	75.84	0.00e+00	1747.00
IUUC-Olo-081034	Oryza longistaminata	74.72	0.00e+00	1717.00
IUUC-Ome-081778	Oryza meridionalis	77.13	0.00e+00	1754.00
IUUC-Oni-082412	Oryza nivara	78.12	0.00e+00	1746.00
IUUC-Opu-083406	Oryza punctata	76.08	0.00e+00	1705.00
IUUC-Oru-084328	Oryza rufipogon	77.47	0.00e+00	1751.00
IUUC-Osa-085765	Oryza sativa	77.21	0.00e+00	1754.00
IUUC-Ppa-095814	Physcomitrella patens	73.18	0.00e+00	1625.00
IUUC-Pop-099918	Populus trichocarpa	78.48	0.00e+00	1775.00
IUUC-Ppe-101370	Prunus persica	79.38	0.00e+00	1844.00
IUUC-Smo-109617	Selaginella moellendorffii	71.07	0.00e+00	1558.00
IUUC-Sit-110288	Setaria italica	77.35	0.00e+00	1750.00
IUUC-Sly-111451	Solanum lycopersicum	77.37	0.00e+00	1753.00
IUUC-Stu-112409	Solanum tuberosum	74.10	0.00e+00	1684.00
IUUC-Sbi-114078	Sorghum bicolor	76.65	0.00e+00	1731.00
IUUC-Tca-121628	Theobroma cacao	78.18	0.00e+00	1815.00
IUUC-Tae-125775	Triticum aestivum	76.98	0.00e+00	1783.00
IUUC-Tur-126412	Triticum urartu	76.49	0.00e+00	1773.00
IUUC-Vvi-131077	Vitis vinifera	80.86	0.00e+00	1815.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence