iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065382

Ensembl Protein ID

GSMUA_Achr4P09920_001

UniProt Accession

M0SMK9; M0SMK9_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr4G09920_001	GSMUA_Achr4T09920_001	GSMUA_Achr4P09920_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-20	71.1	476	512
UBD/Beta-Prp	2.00e-50	172.5	435	704

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgv 34
           H ++v+++af  ++    +++++dD+tikvWD ++g+
   Q: 476  HVGGVNDIAFayPSkqLSVITCGDDKTIKVWDATSGT 512
           999*********5534458*************99986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrs...lsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghed 95
           ++ + +spd+sl+ +++ ++ +++++++ g+ +r+   ++ h ++v+++ f   +k    +t+++D+tikvwd  +g+  +t++ghe+
   Q: 435  VNRIIWSPDGSLFGVAYSRHIVQIYSYHGGDDIRQhleIEAHVGGVNDIAFAYPSKqlSVITCGDDKTIKVWDATSGTKQYTFEGHEA 522
           566888************************99654211699**********977776889**************************** PP
   S: 96   svlslsfsp..sg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr....tvrlWdlktgkllrtlt 176
            v+s+  +   +   ++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+++ +    ++  W+ + g + rt +
   Q: 523  PVYSVCPHHkeNIqAFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCGTSKegetFIVEWNESEGAVKRTYQ 609
           ****888777744599999999*******99998777756555.56999999***9*999999885422226777888********** PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlq 261
           g  ++s   ++fd ++++++++++   +k+wd+ +++++ t+ +    + s  +rf +++++l+  ++D+ i+i  +++   ll+tl+
   Q: 610  GFRKRSLGVVQFDTTRNRFLAAGDEFLIKFWDMDNTNILTTVDADGGLPASprIRFNKEGTLLAISTHDNGIKILaNTDGLRLLRTLE 697
           ********************************************9988775338888*****************76888888888888 PP
   S: 262  lhn...s 265
           ++    s
   Q: 698  NRSfdaS 704
           8766541 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVHNGNW DNVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCGCTCGG ATCGATCGCT CTCCCCATCC ACCGCCCGGT CTTTTACTTG CAGGTGAGCT 60
GGGATCGTTG CCTCGATCTT TCCCCTTTTC GATGGAATCA TCGAGCAAAA GTCAGCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	81.33	0.00e+00	1910.00
IUUC-Atr-002737	Amborella trichopoda	78.77	0.00e+00	1793.00
IUUC-Aly-005472	Arabidopsis lyrata	77.82	0.00e+00	1759.00
IUUC-Ath-007021	Arabidopsis thaliana	77.99	0.00e+00	1793.00
IUUC-Bdi-014914	Brachypodium distachyon	81.23	0.00e+00	1872.00
IUUC-Bol-015359	Brassica oleracea	77.58	0.00e+00	1761.00
IUUC-Bra-016893	Brassica rapa	77.21	0.00e+00	1760.00
IUUC-Gma-043911	Glycine max	80.76	0.00e+00	1850.00
IUUC-Hvu-047688	Hordeum vulgare	82.33	0.00e+00	1809.00
IUUC-Lpe-051514	Leersia perrieri	80.52	0.00e+00	1816.00
IUUC-Mtr-058037	Medicago truncatula	79.88	0.00e+00	1828.00
IUUC-Oba-075912	Oryza barthii	83.16	0.00e+00	1888.00
IUUC-Obr-076921	Oryza brachyantha	82.60	0.00e+00	1897.00
IUUC-Ogl-077334	Oryza glaberrima	82.96	0.00e+00	1906.00
IUUC-Ogu-078494	Oryza glumaepatula	82.96	0.00e+00	1906.00
IUUC-Oin-079720	Oryza indica	81.43	0.00e+00	1897.00
IUUC-Olo-081034	Oryza longistaminata	80.83	0.00e+00	1876.00
IUUC-Ome-081778	Oryza meridionalis	82.96	0.00e+00	1910.00
IUUC-Oni-082412	Oryza nivara	82.88	0.00e+00	1888.00
IUUC-Opu-083406	Oryza punctata	81.58	0.00e+00	1844.00
IUUC-Oru-084328	Oryza rufipogon	82.97	0.00e+00	1896.00
IUUC-Osa-085765	Oryza sativa	82.96	0.00e+00	1906.00
IUUC-Pop-098876	Populus trichocarpa	78.94	0.00e+00	1820.00
IUUC-Smo-109617	Selaginella moellendorffii	69.28	0.00e+00	1531.00
IUUC-Sit-110288	Setaria italica	83.06	0.00e+00	1900.00
IUUC-Stu-112409	Solanum tuberosum	69.23	0.00e+00	1608.00
IUUC-Sbi-114078	Sorghum bicolor	82.70	0.00e+00	1892.00
IUUC-Tca-121628	Theobroma cacao	80.12	0.00e+00	1862.00
IUUC-Tae-125775	Triticum aestivum	81.87	0.00e+00	1921.00
IUUC-Tur-126412	Triticum urartu	81.32	0.00e+00	1908.00
IUUC-Vvi-131079	Vitis vinifera	80.17	0.00e+00	1831.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence