iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112775

Ensembl Protein ID

PGSC0003DMT400014419

UniProt Accession

M1A470; M1A470_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401005658	PGSC0003DMT400014419	PGSC0003DMT400014419

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-45	149.9	149	185
UBD/Beta-Prp	1.60e-54	186.4	137	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgv 34
           H+d+v+c++f  ++  +++vsGs+D t+k+W+l+ ++
   Q: 149  HSDWVSCVRFspNTlqPTIVSGSWDRTVKIWNLTNCK 185
           ***********6445677**************99876 PP

UBD/Beta-Prp

   S: 84   gkcvhtlk...ghedsvlslsfspsg..dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
           g+c +t++    h+d v +++fsp++   ++vsGs+drt+++w+l + +  + tl+gh+g vn+v+v+pdg+l++sG++D+++ lWdl+
   Q: 137  GECKYTIQdgdSHSDWVSCVRFSPNTlqPTIVSGSWDRTVKIWNLTNCKLRS-TLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLA 224
           678888888879************6667*****************9999988.************************************ PP
   S: 168  tgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
            gk l+ l     + ++ l f++n ++ + +++ +++k+wdl+++++v+ l+
   Q: 225  EGKKLYSLD--ASSIIHTLCFSPN-RYWLCAATESSIKIWDLESKTIVVDLR 273
           ********6..5899999*****9.699999***************988765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS IIVWSLTKDG AQYGVPRRRL 60
TGHGHFVQDV VLSSDGMFAL SGSWDGELRL WDLQAGTTAR RFVGHTKDVL SVAFSVDNRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTTTCTT CACTGCTATA TCGTCGTCTC ATTTGCCTCC AGAGGAAAAC CGGAGCGGCG 60
ACCACCTTGC TTGACAAAAT GGCGCAAGAA TCACTTGTCC TTCGCGGCAC CATGAAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005806	Arabidopsis lyrata	81.54	2.00e-159	553.00
IUUC-Ath-007584	Arabidopsis thaliana	81.85	1.00e-159	554.00
IUUC-Cel-018335	Caenorhabditis elegans	57.75	1.00e-100	358.00
IUUC-Gma-042872	Glycine max	86.11	5.00e-166	575.00
IUUC-Mtr-058808	Medicago truncatula	87.04	1.00e-166	577.00
IUUC-Olu-087817	Ostreococcus lucimarinus	70.31	6.00e-137	478.00
IUUC-Ppa-095752	Physcomitrella patens	74.30	1.00e-143	501.00
IUUC-Pop-099345	Populus trichocarpa	82.62	9.00e-163	564.00
IUUC-Sce-106224	Saccharomyces cerevisiae	46.18	3.00e-83	300.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	58.20	2.00e-109	387.00
IUUC-Spo-108297	Schizosaccharomyces pombe	56.66	7.00e-106	375.00
IUUC-Smo-109017	Selaginella moellendorffii	69.63	3.00e-134	469.00
IUUC-Sit-110060	Setaria italica	72.86	2.00e-140	490.00
IUUC-Sly-111218	Solanum lycopersicum	98.47	0.00e+00	652.00
IUUC-Sbi-114610	Sorghum bicolor	72.27	4.00e-140	489.00
IUUC-Tca-120951	Theobroma cacao	85.49	1.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence