iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001989

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

ACTA01033687

Gene Name

LONRF1; PANDA_008229

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000007160.1	ENSAMET00000007847.1	ENSAMEP00000007531.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.70e-07	29.2	236	283
E3 activity/RING/RING	8.80e-07	29.5	240	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 236  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKE 283
           68***********************************9.*******986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 240  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHTPYCPLCK 278
           **********.9**************999......9*********7 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

SEPSDVTLKI YRAESYAGLQ EFKAAIEDLN AVLFQLPNWP EVYFRKGKVL QDAGFLSDAL 60
QLFLQCLALD EDFAPAKLEV EKILCDLLSP ENLKEGLKDS SWSSLSCSKN KPFGFPSVME 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGAGCCCA GTGATGTGAC TCTAAAAATT TACCGAGCGG AATCATACGC TGGTCTCCAA 60
GAGTTTAAAG CAGCCATAGA AGACTTAAAT GCAGTTCTCT TTCAACTGCC AAATTGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002972	Amborella trichopoda	41.26	3.00e-43	169.00
IUUC-Apl-003309	Anas platyrhynchos	77.16	0.00e+00	638.00
IUUC-Aca-004288	Anolis carolinensis	70.22	0.00e+00	756.00
IUUC-Aly-005476	Arabidopsis lyrata	35.58	7.00e-41	161.00
IUUC-Ath-006654	Arabidopsis thaliana	35.58	3.00e-41	162.00
IUUC-Ate-010489	Aspergillus terreus	32.24	2.00e-39	157.00
IUUC-Ame-010716	Astyanax mexicanus	56.80	2.00e-171	595.00
IUUC-Bta-012903	Bos taurus	93.42	0.00e+00	1016.00
IUUC-Bdi-014333	Brachypodium distachyon	42.03	2.00e-42	166.00
IUUC-Bol-016150	Brassica oleracea	35.25	3.00e-41	162.00
IUUC-Bra-016716	Brassica rapa	33.82	2.00e-38	153.00
IUUC-Cja-019312	Callithrix jacchus	92.11	0.00e+00	993.00
IUUC-Cfa-020159	Canis familiaris	97.93	0.00e+00	1059.00
IUUC-Cpo-022528	Cavia porcellus	90.62	0.00e+00	953.00
IUUC-Csa-023361	Chlorocebus sabaeus	92.11	0.00e+00	937.00
IUUC-Cho-024549	Choloepus hoffmanni	83.27	0.00e+00	814.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	32.31	3.00e-46	179.00
IUUC-Cme-027153	Cyanidioschyzon merolae	29.81	9.00e-29	121.00
IUUC-Dre-028195	Danio rerio	55.94	6.00e-170	591.00
IUUC-Dno-029284	Dasypus novemcinctus	89.70	0.00e+00	982.00
IUUC-Dor-031123	Dipodomys ordii	77.88	0.00e+00	689.00
IUUC-Dme-031919	Drosophila melanogaster	36.73	3.00e-65	243.00
IUUC-Ete-032455	Echinops telfairi	89.83	0.00e+00	761.00
IUUC-Eca-033248	Equus caballus	94.74	0.00e+00	774.00
IUUC-Eeu-034441	Erinaceus europaeus	92.55	0.00e+00	807.00
IUUC-Fca-035551	Felis catus	96.25	0.00e+00	1050.00
IUUC-Fal-036731	Ficedula albicollis	75.71	0.00e+00	811.00
IUUC-Gmo-039315	Gadus morhua	53.14	9.00e-153	533.00
IUUC-Gga-040888	Gallus gallus	77.80	0.00e+00	675.00
IUUC-Gac-042121	Gasterosteus aculeatus	56.42	4.00e-165	575.00
IUUC-Gma-042919	Glycine max	33.33	2.00e-38	153.00
IUUC-Ggo-044985	Gorilla gorilla	92.11	0.00e+00	998.00
IUUC-Hsa-046592	Homo sapiens	91.92	0.00e+00	994.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	92.29	0.00e+00	1002.00
IUUC-Lch-050404	Latimeria chalumnae	64.44	0.00e+00	655.00
IUUC-Laf-053431	Loxodonta africana	90.45	0.00e+00	984.00
IUUC-Mcc-055751	Macaca mulatta	89.85	0.00e+00	904.00
IUUC-Mtr-058075	Medicago truncatula	32.87	4.00e-42	165.00
IUUC-Mla-058946	Melampsora laricipopulina	35.12	3.00e-47	182.00
IUUC-Mvi-060228	Microbotryum violaceum	33.98	5.00e-47	182.00
IUUC-Mmr-061283	Microcebus murinus	92.67	0.00e+00	1003.00
IUUC-Mmu-063169	Mus musculus	87.59	0.00e+00	939.00
IUUC-Mac-065566	Musa acuminata	38.10	3.00e-44	172.00
IUUC-Mpu-066537	Mustela putorius furo	97.37	0.00e+00	1029.00
IUUC-Mlu-067497	Myotis lucifugus	92.70	0.00e+00	1006.00
IUUC-Nfi-068337	Neosartorya fischeri	28.53	9.00e-38	151.00
IUUC-Nle-068971	Nomascus leucogenys	92.12	0.00e+00	957.00
IUUC-Opr-070791	Ochotona princeps	90.99	0.00e+00	884.00
IUUC-Ont-071548	Oreochromis niloticus	58.01	4.00e-173	601.00
IUUC-Oan-072747	Ornithorhynchus anatinus	83.33	0.00e+00	702.00
IUUC-Ocu-074928	Oryctolagus cuniculus	93.23	0.00e+00	778.00
IUUC-Oba-075239	Oryza barthii	41.06	5.00e-42	165.00
IUUC-Obr-076158	Oryza brachyantha	40.09	4.00e-44	172.00
IUUC-Ogu-078154	Oryza glumaepatula	41.55	2.00e-42	167.00
IUUC-Oin-079067	Oryza indica	37.90	1.00e-42	167.00
IUUC-Olo-080663	Oryza longistaminata	41.06	7.00e-42	164.00
IUUC-Oni-082119	Oryza nivara	36.16	7.00e-43	168.00
IUUC-Opu-083266	Oryza punctata	42.11	5.00e-31	128.00
IUUC-Oru-085190	Oryza rufipogon	41.06	1.00e-41	164.00
IUUC-Ola-086977	Oryzias latipes	57.33	7.00e-171	593.00
IUUC-Oga-088719	Otolemur garnettii	91.17	0.00e+00	967.00
IUUC-Oar-089577	Ovis aries	93.26	0.00e+00	1019.00
IUUC-Ptr-090711	Pan troglodytes	92.11	0.00e+00	996.00
IUUC-Pan-092587	Papio anubis	92.11	0.00e+00	978.00
IUUC-Psi-093128	Pelodiscus sinensis	76.40	0.00e+00	823.00
IUUC-Pfo-096474	Poecilia formosa	57.33	8.00e-171	593.00
IUUC-Pab-097800	Pongo abelii	90.79	0.00e+00	973.00
IUUC-Pop-100044	Populus trichocarpa	34.03	3.00e-43	169.00
IUUC-Ppe-101621	Prunus persica	37.84	1.00e-35	144.00
IUUC-Rno-105718	Rattus norvegicus	88.53	0.00e+00	947.00
IUUC-Sit-110495	Setaria italica	37.44	2.00e-41	164.00
IUUC-Sly-111396	Solanum lycopersicum	33.56	6.00e-42	165.00
IUUC-Sar-113220	Sorex araneus	88.58	0.00e+00	726.00
IUUC-Sbi-114779	Sorghum bicolor	36.93	1.00e-28	120.00
IUUC-Ssc-115733	Sus scrofa	93.23	0.00e+00	1016.00
IUUC-Tgu-117431	Taeniopygia guttata	71.16	0.00e+00	769.00
IUUC-Tru-118274	Takifugu rubripes	57.96	7.00e-169	587.00
IUUC-Tsy-119043	Tarsius syrichta	91.93	0.00e+00	972.00
IUUC-Tni-120766	Tetraodon nigroviridis	53.68	2.00e-154	539.00
IUUC-Tca-121632	Theobroma cacao	30.74	2.00e-43	170.00
IUUC-Tae-124676	Triticum aestivum	34.25	2.00e-42	166.00
IUUC-Tur-126297	Triticum urartu	40.74	6.00e-32	132.00
IUUC-Tme-127112	Tuber melanosporum	37.69	1.00e-47	184.00
IUUC-Tbe-127284	Tupaia belangeri	89.66	0.00e+00	774.00
IUUC-Vda-129721	Verticillium dahliae	27.88	4.00e-36	145.00
IUUC-Vpa-130408	Vicugna pacos	85.34	0.00e+00	886.00
IUUC-Vvi-130910	Vitis vinifera	32.53	8.00e-39	154.00
IUUC-Xtr-132417	Xenopus tropicalis	65.67	0.00e+00	691.00
IUUC-Xma-134099	Xiphophorus maculatus	56.35	8.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence