• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP
  • SNP
    • dbSNP
  • mRNA Expression
    • GEO
  • DNA & RNA Element
    • TRANSFAC
  • PPI
    • HINT
  • Proteomics
    • GPMDB

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006673
UUCD1 version UUC-ArT-00123
Ensembl Protein ID AT1G27840.3
UniProt Accession F4HUT3; F4HUT3_ARATH
Genbank Protein ID AEE30883.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002684
Gene Name ATCSA-1; At1g27840; F28L5.15; F28L5_15
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G27840 AT1G27840.3 AT1G27840.3
AT1G27840 AT1G27840.1 AT1G27840.1
AT1G27840 AT1G27840.2 AT1G27840.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-28 98.2 188 225
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d+v ++++  s+ + l +G+ Dg i+ WD+r+  +
   Q: 188  GHRDGVMSVEWstSSeWVLYTGGCDGAIRFWDIRRAGC 225
           8***********955699**************987765 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MWEAIKDRET GRIRSNSFAN RFKSRRILSL QLSNRKDFVS PHRGSVNSLQ VDLTEGRYLL 60
SGAADGSAAV FDVQRATDYE ASGLIAKHKC IFTVDKQHEN GHKYAISSAI WYPIDTGLFI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006673|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGCTAAAGAA GATCAAAAAC TTTTCTTAGG GCTTTGGAGA TTCGAGCTCG AGTATTCATA 60
CAAGTCTGGT GATATCCACG AAAATCAGAA GACGAGATGC TAGGAGAATG TGGGAGGCTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006673|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002201 Ailuropoda melanoleuca 40.67 1.00e-45 176.00
IUUC-Atr-002784 Amborella trichopoda 63.30 2.00e-166 577.00
IUUC-Apl-003202 Anas platyrhynchos 41.43 5.00e-47 181.00
IUUC-Aly-006144 Arabidopsis lyrata 95.57 0.00e+00 895.00
IUUC-Acl-008195 Aspergillus clavatus 31.13 8.00e-30 124.00
IUUC-Afl-008406 Aspergillus flavus 30.23 4.00e-27 115.00
IUUC-Afu-008759 Aspergillus fumigatus 29.46 5.00e-28 118.00
IUUC-Ani-009380 Aspergillus nidulans 30.06 5.00e-30 124.00
IUUC-Ang-009820 Aspergillus niger 30.46 8.00e-26 110.00
IUUC-Aor-010092 Aspergillus oryzae 30.55 4.00e-33 135.00
IUUC-Ate-010491 Aspergillus terreus 30.70 3.00e-31 129.00
IUUC-Bta-012825 Bos taurus 40.67 3.00e-45 175.00
IUUC-Bci-013856 Botrytis cinerea 27.18 4.00e-39 155.00
IUUC-Bdi-014899 Brachypodium distachyon 60.22 4.00e-154 537.00
IUUC-Bol-015337 Brassica oleracea 85.18 0.00e+00 803.00
IUUC-Bra-018089 Brassica rapa 87.61 0.00e+00 820.00
IUUC-Cja-018725 Callithrix jacchus 40.19 2.00e-46 179.00
IUUC-Cfa-021162 Canis familiaris 40.67 1.00e-45 176.00
IUUC-Cpo-022190 Cavia porcellus 39.71 8.00e-46 177.00
IUUC-Cre-022960 Chlamydomonas reinhardtii 34.99 2.00e-68 252.00
IUUC-Csa-023610 Chlorocebus sabaeus 39.71 2.00e-45 176.00
IUUC-Cho-024689 Choloepus hoffmanni 29.24 4.00e-43 167.00
IUUC-Csv-026059 Ciona savignyi 33.17 4.00e-30 124.00
IUUC-Cme-027182 Cyanidioschyzon merolae 29.01 2.00e-16 80.50
IUUC-Dno-029102 Dasypus novemcinctus 38.76 5.00e-45 174.00
IUUC-Dor-030361 Dipodomys ordii 31.31 5.00e-27 114.00
IUUC-Ete-032856 Echinops telfairi 34.05 1.00e-30 126.00
IUUC-Eca-033611 Equus caballus 40.80 2.00e-37 148.00
IUUC-Eeu-034583 Erinaceus europaeus 29.67 9.00e-25 107.00
IUUC-Fca-036481 Felis catus 40.19 9.00e-46 176.00
IUUC-Fox-037684 Fusarium oxysporum 28.48 2.00e-29 123.00
IUUC-Fso-038306 Fusarium solani 29.81 1.00e-33 137.00
IUUC-Ggr-039783 Gaeumannomyces graminis 30.51 9.00e-27 114.00
IUUC-Gac-042328 Gasterosteus aculeatus 38.76 1.00e-43 169.00
IUUC-Gma-042916 Glycine max 66.96 7.00e-175 605.00
IUUC-Ggo-045627 Gorilla gorilla 31.46 2.00e-51 195.00
IUUC-Hsa-046028 Homo sapiens 39.71 2.00e-45 176.00
IUUC-Hvu-047678 Hordeum vulgare 57.81 7.00e-97 346.00
IUUC-Itr-048648 Ictidomys tridecemlineatus 39.11 9.00e-47 180.00
IUUC-Kpa-049386 Komagataella pastoris 27.51 4.00e-31 128.00
IUUC-Lch-050590 Latimeria chalumnae 37.07 5.00e-43 167.00
IUUC-Lpe-051725 Leersia perrieri 46.55 1.00e-89 322.00
IUUC-Lma-053082 Leptosphaeria maculans 29.45 2.00e-43 169.00
IUUC-Laf-053809 Loxodonta africana 40.67 1.00e-46 179.00
IUUC-Mcc-054998 Macaca mulatta 39.71 1.00e-45 176.00
IUUC-Mor-057003 Magnaporthe oryzae 30.09 1.00e-33 137.00
IUUC-Mtr-057921 Medicago truncatula 65.78 1.00e-173 602.00
IUUC-Mga-059449 Meleagris gallopavo 40.12 5.00e-34 137.00
IUUC-Mmr-061609 Microcebus murinus 36.84 6.00e-40 157.00
IUUC-Mmu-063904 Mus musculus 41.15 2.00e-46 179.00
IUUC-Mac-064716 Musa acuminata 62.77 9.00e-167 578.00
IUUC-Mpu-066617 Mustela putorius furo 40.67 1.00e-45 176.00
IUUC-Mlu-067054 Myotis lucifugus 30.71 3.00e-47 181.00
IUUC-Nfi-068467 Neosartorya fischeri 29.24 3.00e-22 99.00
IUUC-Nle-069731 Nomascus leucogenys 39.71 2.00e-45 176.00
IUUC-Opr-070297 Ochotona princeps 25.59 1.00e-14 73.20
IUUC-Ont-072558 Oreochromis niloticus 38.76 1.00e-42 166.00
IUUC-Oan-072864 Ornithorhynchus anatinus 50.88 2.00e-13 65.90
IUUC-Ocu-074415 Oryctolagus cuniculus 39.71 2.00e-45 175.00
IUUC-Oba-075759 Oryza barthii 61.88 3.00e-150 524.00
IUUC-Obr-076387 Oryza brachyantha 62.21 4.00e-154 536.00
IUUC-Ogl-077924 Oryza glaberrima 62.22 6.00e-42 162.00
IUUC-Ogu-078186 Oryza glumaepatula 56.50 1.00e-137 481.00
IUUC-Oin-079389 Oryza indica 63.23 4.00e-56 211.00
IUUC-Ome-081471 Oryza meridionalis 62.76 6.00e-119 420.00
IUUC-Oni-082449 Oryza nivara 62.63 2.00e-141 495.00
IUUC-Opu-083210 Oryza punctata 62.59 2.00e-151 528.00
IUUC-Oru-085159 Oryza rufipogon 61.70 7.00e-149 519.00
IUUC-Osa-085926 Oryza sativa 72.90 6.00e-68 249.00
IUUC-Olu-087853 Ostreococcus lucimarinus 34.20 6.00e-61 227.00
IUUC-Oga-089008 Otolemur garnettii 39.23 3.00e-45 174.00
IUUC-Oar-089259 Ovis aries 40.67 3.00e-45 175.00
IUUC-Ptr-091112 Pan troglodytes 39.71 2.00e-45 176.00
IUUC-Pan-092303 Papio anubis 40.62 3.00e-15 73.20
IUUC-Pma-094259 Petromyzon marinus 31.88 6.00e-43 167.00
IUUC-Pno-094798 Phaeosphaeria nodorum 28.88 2.00e-42 166.00
IUUC-Ppa-095477 Physcomitrella patens 50.76 1.00e-133 469.00
IUUC-Pfo-096855 Poecilia formosa 33.90 9.00e-64 236.00
IUUC-Pab-098096 Pongo abelii 39.71 2.00e-45 176.00
IUUC-Pop-098800 Populus trichocarpa 69.38 0.00e+00 654.00
IUUC-Pca-100187 Procavia capensis 39.46 3.00e-39 154.00
IUUC-Ppe-101759 Prunus persica 72.28 0.00e+00 663.00
IUUC-Pva-102438 Pteropus vampyrus 41.06 1.00e-31 130.00
IUUC-Pte-104197 Pyrenophora teres 28.79 1.00e-42 166.00
IUUC-Pyt-104421 Pyrenophora triticirepentis 27.95 5.00e-37 147.00
IUUC-Rno-106087 Rattus norvegicus 41.15 3.00e-46 178.00
IUUC-Sha-106831 Sarcophilus harrisii 33.90 2.00e-64 238.00
IUUC-Sja-107681 Schizosaccharomyces japonicus 26.47 1.00e-38 152.00
IUUC-Spo-108294 Schizosaccharomyces pombe 39.68 5.00e-35 141.00
IUUC-Ssl-108613 Sclerotinia sclerotiorum 28.87 1.00e-41 163.00
IUUC-Smo-109008 Selaginella moellendorffii 46.37 2.00e-118 418.00
IUUC-Sit-110300 Setaria italica 63.47 7.00e-154 536.00
IUUC-Sly-111441 Solanum lycopersicum 68.49 8.00e-172 595.00
IUUC-Stu-111995 Solanum tuberosum 68.93 2.00e-174 604.00
IUUC-Sar-113196 Sorex araneus 44.17 5.00e-23 101.00
IUUC-Sbi-113790 Sorghum bicolor 62.17 3.00e-149 521.00
IUUC-Ssc-115609 Sus scrofa 41.15 3.00e-46 178.00
IUUC-Tgu-116927 Taeniopygia guttata 43.06 4.00e-48 184.00
IUUC-Tni-120896 Tetraodon nigroviridis 37.80 8.00e-43 167.00
IUUC-Tca-121592 Theobroma cacao 69.74 0.00e+00 657.00
IUUC-Tre-122023 Trichoderma reesei 31.44 1.00e-34 140.00
IUUC-Tvi-122507 Trichoderma virens 32.02 4.00e-35 141.00
IUUC-Tae-125276 Triticum aestivum 61.32 3.00e-146 510.00
IUUC-Tbe-127422 Tupaia belangeri 33.50 3.00e-27 115.00
IUUC-Ttr-129097 Tursiops truncatus 40.29 3.00e-44 172.00
IUUC-Vda-130014 Verticillium dahliae 31.51 1.00e-29 123.00
IUUC-Vpa-130782 Vicugna pacos 30.64 2.00e-46 178.00
IUUC-Vvi-131494 Vitis vinifera 67.97 0.00e+00 632.00
IUUC-Yli-134614 Yarrowia lipolytica 29.24 2.00e-41 162.00
IUUC-Zma-135861 Zea mays 62.91 4.00e-149 520.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved