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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006822
UUCD1 version UUC-ArT-00747
Ensembl Protein ID AT1G28040.1
UniProt Accession Q9C7E9; Q1PFR9; ATL20_ARATH
Genbank Protein ID AAG51486.1; AEE30905.1; ABE65658.1
Protein Name RING-H2 finger protein ATL20; RING-type E3 ubiquitin transferase ATL20
Genbank Nucleotide ID AC069471; CP002684; DQ446294
Gene Name ATL20; At1g28040; F13K9.14
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G28040 AT1G28040.1 AT1G28040.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.20e-06 29.0 253 295
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    C+iCl+++ k+ ++++p C H+fh +C+ w + + +CP+Cr
   Q: 253 CPICLSEYasKETVRCMPeCDHCFHVQCIDEW------LKIHSSCPVCR 295
    ********9966699999**************......**********8 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MSGTFLVDEI NYQKQQISIS DPENCMVKRL LTFNTSGSPF SYGFSFYYTF LTCPNEVVIP 60
VWSLMSIPCL SNSTSSFFAT SNLTFSKLLP PSCQIVKGLY VPVDVIYKDV ITEEKGFSTV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006822|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTGTTA ATCAAAGTTT TCCAAGTCCA GTTCGCAGAT GGCGAGCGGA TCTGCGGCTG 60
TGGTTCTTCG TTGCTGTTTC TTTGGTGGTT CTGGCTGTGT TGGCCAATTC AGAAGGTATA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006822|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG ath:AT1G28040
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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