iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007429

UUCD1 version

UUC-ArT-01440

Ensembl Protein ID

AT1G49210.1

UniProt Accession

Q6NML0; Q4FE33; Q9M9C0; ATL76_ARATH

Genbank Protein ID

AAZ14074.1; AAF69722.1; AEE32405.1; AAR24710.1; AAS47653.1

Protein Name

E3 ubiquitin-protein ligase ATL76; RING-H2 finger protein ATL76; RING-type E3 ubiquitin transferase ATL76

Genbank Nucleotide ID

DQ086858; AC016041; CP002684; BT010932; BT011647

Gene Name

ATL76; At1g49210; F27J15.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G49210	AT1G49210.1	AT1G49210.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.90e-05	26.0	135	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+df   +++++lp C+H fh  C+ kw       + + +CP Cr
   Q: 135  CVICLSDFvsGEQLRLLPkCNHGFHVRCIDKW------LQHHLTCPKCR 177
           ********99555*******************......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro.

Protein Sequence
(Fasta)

MSANELPASA QSLQEQFLGS FVTRKLLLHD PFDHNSLRVF AVAPSPLITH ENNLKGNVLM 60
LLSVLICGII CCLGLHYIIR CAFRRSSRFM ISEPISSLST PRSSSNKGIK KKALRMFPVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACCACTT TGAATTCCCC AAAACTTAAA AAAGCAATAA GCAAACAAAG CCAAGAAAAG 60
CAGAGAGAAC AGACTTTGAT TTAAAGCTTT TTCAAAGAGT AAAACATGTC TGCAAACGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

ath:AT1G49210

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence