iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007444

Ensembl Protein ID

AT1G49450.1

UniProt Accession

Q9XIB2; Q9XIB2_ARATH

Genbank Protein ID

AAD43155.1; AEE32431.1

Protein Name

F13F21.11 protein; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

AC007504; CP002684

Gene Name

At1g49450; F13F21.11; F13F21_11

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G49450	AT1G49450.1	AT1G49450.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-30	103.1	244	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+cl++  d +ll sGs+D+t+kvW+l++ ++l 
   Q: 244  HFDAVSCLSLnEDlGLLYSGSWDKTLKVWRLSDSKCLE 281
           7899******8779*******************99986 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS 60
ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT YSPYHKSPWI YQTRNSDFED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGTCCACC ACGTGTCACT CTTACACGTT CATAAGTTTT CCCACCTTTC TACGTCCGAT 60
TCTGTATTTA TATACCCTAA ACCCATCGTC TTCTATACAT GCTCTTATTT CACAATCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ath:AT1G49450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-016865	Brassica rapa	83.58	0.00e+00	768.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence