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Tag Content
iUUCD ID IUUC-Aly-006007
Ensembl Protein ID fgenesh2_kg.1__4375__AT1G53010.1
UniProt Accession D7KKC9; D7KKC9_ARALL
Genbank Protein ID EFH67983.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID GL348713
Gene Name ARALYDRAFT_474421
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.1__4375__AT1G53010.1 fgenesh2_kg.1__4375__AT1G53010.1 fgenesh2_kg.1__4375__AT1G53010.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.60e-06 29.2 129 171
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    CaiCl+ + ++ +v p C H++ha C+ w +++ +CP+Cr
   Q: 129 CAICLSGYviNEECRVFPvCRHIYHALCIDTW------LKNHLTCPTCR 171
    ******9999444777777*************......**********8 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MSSEEDVFSL ISVLGLAVFI GLCILLVVLI ATSALILVIY AIVDCILRPF LGTCLDLDLE 60
IGVQRGQQRA RIVTYHAIIP TGLRLPDFER EGKKRGLKQS AIETLLPKLL VGQGNHEDDK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006007|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGCTCAG AAGAAGATGT GTTTAGTCTC ATCAGCGTTC TTGGTCTCGC CGTTTTCATC 60
GGTCTCTGCA TCTTGCTCGT TGTTCTTATT GCAACCTCAG CTCTCATTCT TGTAATCTAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006007|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG aly:ARALYDRAFT_474421
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ath-006973 Arabidopsis thaliana 92.13 6.00e-86 308.00
IUUC-Bol-015825 Brassica oleracea 83.15 6.00e-75 272.00
IUUC-Bra-016968 Brassica rapa 81.46 2.00e-73 267.00
IUUC-Gma-043209 Glycine max 39.22 4.00e-14 70.50
IUUC-Mtr-057851 Medicago truncatula 44.71 3.00e-14 70.90
Created Date 25-Jun-2017

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