iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006502

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_892627

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_105421.1	scaffold_105421.1	scaffold_105421.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.60e-21	74.3	371	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           +p+ f  pI+ e+M+dP+ +++G ty+++sI+kw+++g++t+P+t+ pl + +lvPn +lr  i++
   Q: 371  PPSSFFYPITQEVMNDPHFAADGFTYEAESIRKWFRTGHQTSPMTNLPLPHLTLVPNRALRTAIEE 436
           7999**********************************************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVFLFMSQSL VSCIFDMAMV ENSYVLFARL CVELFHELPP LPSDESHGDI TTFERLFLRK 60
CRIELENSSP KTEHLPLVYV DESNCYRFIK TVRVLAEVFK NKKITETTRK SIIQVLMNPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATATTATGA GACTTTTCTA ATGGTATTTT TATTTATGTC GCAGTCTCTA GTGTCTTGCA 60
TTTTCGATAT GGCAATGGTG GAAAATTCCT ATGTCTTATT CGCTCGCTTA TGCGTAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR016024--ARM-type_fold
IPR016021--MIF4-like
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_892627

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007386	Arabidopsis thaliana	88.81	0.00e+00	718.00
IUUC-Bol-015135	Brassica oleracea	66.51	3.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence