iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-13	50.1	2369	2399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H+d v+c+a   d t+l++Gs+D t++vWD+
   Q: 2369 HKDVVSCVAVtADsTILATGSYDTTVMVWDI 2399
           9*********9555****************5 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May be involved in the suppression of BCHC1 activity.

Protein Sequence
(Fasta)

MESDSVAGSA SSSDAAASHL PSVSVLLDAL EQSASTPRIA NGLSQRLLRS LQFSNENKLS 60
FKALNGACRV LRLACIQAKE SRKSGCVSPL VESSDCGVIV DSPHKKSDSS HTEDCWFECV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTGATGC TTCATAGCAA CTTTTTATCA CAGACTTGAA GAAGCTTTCT TCTTCGCAGT 60
TTCTCTTCTC AGTGAATCCA CTATCAACCG TTATGCGCCA ATTTTGGAGA TTTTCTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

KEGG

ath:AT1G58230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000860	Aegilops tauschii	57.02	0.00e+00	1940.00
IUUC-Atr-002998	Amborella trichopoda	60.09	0.00e+00	3130.00
IUUC-Apl-004130	Anas platyrhynchos	37.31	6.00e-138	486.00
IUUC-Aca-005124	Anolis carolinensis	38.49	3.00e-146	513.00
IUUC-Aly-005407	Arabidopsis lyrata	97.89	0.00e+00	2554.00
IUUC-Bta-012509	Bos taurus	38.34	2.00e-141	497.00
IUUC-Bdi-014244	Brachypodium distachyon	54.18	0.00e+00	2051.00
IUUC-Bol-015261	Brassica oleracea	90.32	0.00e+00	4715.00
IUUC-Bra-016877	Brassica rapa	91.49	0.00e+00	4736.00
IUUC-Cja-018744	Callithrix jacchus	38.50	9.00e-143	499.00
IUUC-Cfa-020786	Canis familiaris	38.09	9.00e-144	505.00
IUUC-Cpo-021636	Cavia porcellus	38.12	1.00e-137	485.00
IUUC-Dme-031593	Drosophila melanogaster	37.31	7.00e-131	462.00
IUUC-Ete-032481	Echinops telfairi	37.08	3.00e-121	430.00
IUUC-Eca-033893	Equus caballus	37.82	1.00e-142	501.00
IUUC-Fal-036871	Ficedula albicollis	38.69	2.00e-146	514.00
IUUC-Gmo-039388	Gadus morhua	37.21	1.00e-134	475.00
IUUC-Gga-041206	Gallus gallus	38.33	1.00e-143	505.00
IUUC-Gma-042772	Glycine max	66.25	0.00e+00	3443.00
IUUC-Ggo-045191	Gorilla gorilla	37.33	5.00e-124	438.00
IUUC-Hvu-047772	Hordeum vulgare	57.37	0.00e+00	1752.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	38.31	1.00e-141	498.00
IUUC-Lch-050027	Latimeria chalumnae	39.04	7.00e-142	497.00
IUUC-Lpe-050958	Leersia perrieri	53.88	0.00e+00	2082.00
IUUC-Loc-052771	Lepisosteus oculatus	39.25	3.00e-146	513.00
IUUC-Laf-053724	Loxodonta africana	38.22	1.00e-143	504.00
IUUC-Mcc-055200	Macaca mulatta	38.85	3.00e-143	501.00
IUUC-Mtr-058372	Medicago truncatula	65.73	0.00e+00	3337.00
IUUC-Mga-059851	Meleagris gallopavo	37.92	8.00e-144	503.00
IUUC-Mmr-061112	Microcebus murinus	38.71	6.00e-144	506.00
IUUC-Mdo-062727	Monodelphis domestica	38.63	1.00e-144	508.00
IUUC-Mmu-064194	Mus musculus	39.06	3.00e-143	501.00
IUUC-Mac-064991	Musa acuminata	58.62	0.00e+00	2968.00
IUUC-Mpu-066074	Mustela putorius furo	38.09	1.00e-143	504.00
IUUC-Mlu-067308	Myotis lucifugus	37.83	4.00e-139	489.00
IUUC-Ont-071396	Oreochromis niloticus	37.00	2.00e-138	488.00
IUUC-Oan-073413	Ornithorhynchus anatinus	39.25	2.00e-143	501.00
IUUC-Ocu-074483	Oryctolagus cuniculus	37.45	2.00e-137	483.00
IUUC-Oba-075426	Oryza barthii	53.86	0.00e+00	2089.00
IUUC-Obr-076854	Oryza brachyantha	57.48	0.00e+00	2785.00
IUUC-Ogl-077620	Oryza glaberrima	63.32	0.00e+00	1339.00
IUUC-Ogu-078751	Oryza glumaepatula	54.13	0.00e+00	1711.00
IUUC-Oin-079746	Oryza indica	50.61	0.00e+00	2457.00
IUUC-Olo-081072	Oryza longistaminata	55.05	0.00e+00	1624.00
IUUC-Ome-081391	Oryza meridionalis	55.49	0.00e+00	2694.00
IUUC-Oni-082349	Oryza nivara	54.17	0.00e+00	2141.00
IUUC-Opu-083178	Oryza punctata	54.84	0.00e+00	2582.00
IUUC-Oru-085197	Oryza rufipogon	56.32	0.00e+00	1805.00
IUUC-Osa-085645	Oryza sativa	64.82	3.00e-99	353.00
IUUC-Ola-087242	Oryzias latipes	38.94	4.00e-144	505.00
IUUC-Olu-087890	Ostreococcus lucimarinus	37.76	7.00e-139	487.00
IUUC-Oga-088409	Otolemur garnettii	39.11	6.00e-145	508.00
IUUC-Oar-089217	Ovis aries	38.52	3.00e-142	500.00
IUUC-Ppa-095295	Physcomitrella patens	44.98	0.00e+00	2185.00
IUUC-Pop-099604	Populus trichocarpa	68.77	0.00e+00	3474.00
IUUC-Ppe-101836	Prunus persica	69.99	0.00e+00	2689.00
IUUC-Rno-104971	Rattus norvegicus	38.84	1.00e-142	499.00
IUUC-Sha-107387	Sarcophilus harrisii	38.44	8.00e-144	505.00
IUUC-Smo-108699	Selaginella moellendorffii	53.21	0.00e+00	877.00
IUUC-Sit-110075	Setaria italica	54.15	0.00e+00	2565.00
IUUC-Sly-111033	Solanum lycopersicum	66.95	0.00e+00	2159.00
IUUC-Sbi-114049	Sorghum bicolor	50.91	0.00e+00	1934.00
IUUC-Tgu-117304	Taeniopygia guttata	38.05	3.00e-145	510.00
IUUC-Tni-120239	Tetraodon nigroviridis	37.26	3.00e-138	486.00
IUUC-Tca-121572	Theobroma cacao	69.99	0.00e+00	3620.00
IUUC-Tae-124172	Triticum aestivum	49.12	0.00e+00	1717.00
IUUC-Tur-126212	Triticum urartu	56.79	0.00e+00	1728.00
IUUC-Ttr-128452	Tursiops truncatus	38.81	2.00e-141	497.00
IUUC-Vvi-130860	Vitis vinifera	69.02	0.00e+00	3517.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence