iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13410	POPTR_0014s13410.2	POPTR_0014s13410.2
POPTR_0014s13410	POPTR_0014s13410.1	POPTR_0014s13410.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	27.48	6.00e-18	89.40	IUUC-Hsa-046597

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMIPWGGISC CLSGAALYLL GRSSGRYLPS LIPLFFLIIS SKLLDIESKV LPLVVAISGR 60
VGAESPISCE FSGLRGVIVE ETAEQHFLKH NDAGSWIQDS ALMLSMSKEV PWYLDDGTDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTCTTCCT TTCCTTGTCC CTCTCCTTTA CTCCTCGCAT CTAATTCTCT TTTGTCTCCG 60
CCTAATAATA ATATTCCACC AATTCTCGCA TTTCCTTGCC TTTGATACGG AAATGATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR022170--GIDE
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Pfam

PF12483--GIDE

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006996--P:organelle organization

KEGG

pop:POPTR_0014s13410g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000342	Aegilops tauschii	65.58	3.00e-116	412.00
IUUC-Aml-002287	Ailuropoda melanoleuca	25.74	8.00e-16	77.40
IUUC-Atr-002698	Amborella trichopoda	24.16	1.00e-11	63.50
IUUC-Apl-003704	Anas platyrhynchos	51.06	3.00e-12	65.90
IUUC-Aca-005039	Anolis carolinensis	27.33	4.00e-17	81.30
IUUC-Aly-006181	Arabidopsis lyrata	69.97	2.00e-141	494.00
IUUC-Ath-007438	Arabidopsis thaliana	68.80	1.00e-138	485.00
IUUC-Acl-008281	Aspergillus clavatus	51.02	4.00e-12	67.00
IUUC-Afl-008647	Aspergillus flavus	51.02	1.00e-11	65.90
IUUC-Afu-009000	Aspergillus fumigatus	51.02	3.00e-12	67.40
IUUC-Ani-009211	Aspergillus nidulans	41.89	1.00e-12	68.90
IUUC-Ang-009658	Aspergillus niger	51.02	7.00e-12	66.20
IUUC-Aor-010131	Aspergillus oryzae	51.02	1.00e-11	65.50
IUUC-Ate-010322	Aspergillus terreus	39.44	4.00e-12	67.00
IUUC-Ame-010671	Astyanax mexicanus	26.37	3.00e-14	72.00
IUUC-Bta-012407	Bos taurus	28.80	1.00e-15	76.60
IUUC-Bdi-014735	Brachypodium distachyon	66.47	1.00e-125	442.00
IUUC-Bol-015493	Brassica oleracea	70.38	6.00e-143	499.00
IUUC-Bra-016933	Brassica rapa	69.39	1.00e-133	468.00
IUUC-Cja-019709	Callithrix jacchus	27.27	9.00e-19	87.00
IUUC-Cfa-020818	Canis familiaris	26.60	6.00e-18	84.30
IUUC-Cpo-022490	Cavia porcellus	27.60	1.00e-17	83.20
IUUC-Csa-023259	Chlorocebus sabaeus	27.35	9.00e-20	90.50
IUUC-Cho-024730	Choloepus hoffmanni	28.16	1.00e-20	93.60
IUUC-Cin-025301	Ciona intestinalis	24.69	2.00e-19	89.40
IUUC-Dre-028644	Danio rerio	27.73	1.00e-16	80.10
IUUC-Dno-028925	Dasypus novemcinctus	26.30	2.00e-19	89.40
IUUC-Dor-030692	Dipodomys ordii	27.16	5.00e-17	81.30
IUUC-Dme-031761	Drosophila melanogaster	24.07	6.00e-16	77.80
IUUC-Ete-032329	Echinops telfairi	26.67	1.00e-15	77.00
IUUC-Eca-034008	Equus caballus	28.75	1.00e-19	90.10
IUUC-Eeu-035048	Erinaceus europaeus	51.06	1.00e-11	63.50
IUUC-Fca-036104	Felis catus	26.60	2.00e-18	86.30
IUUC-Fal-036900	Ficedula albicollis	25.25	8.00e-16	77.40
IUUC-Gmo-039049	Gadus morhua	26.39	1.00e-09	56.60
IUUC-Gga-040254	Gallus gallus	26.14	1.00e-18	87.00
IUUC-Gac-042277	Gasterosteus aculeatus	26.45	1.00e-16	80.10
IUUC-Gma-043979	Glycine max	75.95	4.00e-136	476.00
IUUC-Ggo-045509	Gorilla gorilla	27.35	9.00e-20	90.50
IUUC-Hsa-046597	Homo sapiens	27.35	9.00e-20	90.50
IUUC-Hvu-047335	Hordeum vulgare	69.06	4.00e-111	393.00
IUUC-Itr-048691	Ictidomys tridecemlineatus	26.30	3.00e-17	82.00
IUUC-Lch-050344	Latimeria chalumnae	28.09	2.00e-18	86.30
IUUC-Lpe-051343	Leersia perrieri	74.23	9.00e-112	395.00
IUUC-Loc-052376	Lepisosteus oculatus	25.24	3.00e-17	82.00
IUUC-Lma-053223	Leptosphaeria maculans	42.55	2.00e-08	54.70
IUUC-Laf-054414	Loxodonta africana	28.01	2.00e-21	95.90
IUUC-Mcc-054604	Macaca mulatta	27.35	1.00e-19	90.50
IUUC-Meu-056087	Macropus eugenii	25.24	5.00e-17	81.30
IUUC-Mtr-057779	Medicago truncatula	70.09	4.00e-131	460.00
IUUC-Mga-060188	Meleagris gallopavo	25.82	6.00e-18	84.00
IUUC-Mmr-060704	Microcebus murinus	26.95	5.00e-19	88.20
IUUC-Mdo-062842	Monodelphis domestica	25.65	2.00e-17	82.40
IUUC-Mmu-064324	Mus musculus	24.58	5.00e-16	78.20
IUUC-Mpu-065940	Mustela putorius furo	26.23	1.00e-16	80.10
IUUC-Mlu-067028	Myotis lucifugus	26.38	6.00e-20	90.90
IUUC-Nfi-068377	Neosartorya fischeri	48.98	3.00e-11	63.90
IUUC-Nle-069254	Nomascus leucogenys	28.21	2.00e-18	85.90
IUUC-Opr-070827	Ochotona princeps	27.45	6.00e-21	94.40
IUUC-Ont-072008	Oreochromis niloticus	25.27	9.00e-15	73.90
IUUC-Oan-072935	Ornithorhynchus anatinus	25.89	5.00e-19	88.20
IUUC-Ocu-074526	Oryctolagus cuniculus	27.60	3.00e-17	81.60
IUUC-Oba-075954	Oryza barthii	64.63	5.00e-118	416.00
IUUC-Obr-076592	Oryza brachyantha	68.51	1.00e-138	485.00
IUUC-Ogl-077732	Oryza glaberrima	68.51	1.00e-138	485.00
IUUC-Ogu-078565	Oryza glumaepatula	67.74	2.00e-120	424.00
IUUC-Oin-080188	Oryza indica	68.51	1.00e-138	485.00
IUUC-Olo-080705	Oryza longistaminata	28.00	1.00e-13	70.90
IUUC-Ome-081154	Oryza meridionalis	67.74	6.00e-119	420.00
IUUC-Oni-082201	Oryza nivara	64.63	5.00e-118	416.00
IUUC-Opu-083497	Oryza punctata	67.74	1.00e-120	425.00
IUUC-Oru-084332	Oryza rufipogon	64.63	5.00e-118	416.00
IUUC-Osa-086059	Oryza sativa	73.66	6.00e-112	396.00
IUUC-Ola-087288	Oryzias latipes	24.40	1.00e-10	60.10
IUUC-Oga-088402	Otolemur garnettii	26.13	3.00e-18	85.50
IUUC-Ptr-091226	Pan troglodytes	27.06	2.00e-19	89.40
IUUC-Pan-092575	Papio anubis	27.35	2.00e-19	89.70
IUUC-Psi-094062	Pelodiscus sinensis	26.45	2.00e-18	86.30
IUUC-Pma-094501	Petromyzon marinus	25.78	2.00e-05	43.10
IUUC-Pno-094968	Phaeosphaeria nodorum	35.21	8.00e-09	56.60
IUUC-Ppa-095285	Physcomitrella patens	60.23	1.00e-109	389.00
IUUC-Pfo-096146	Poecilia formosa	24.00	5.00e-10	58.20
IUUC-Pab-098524	Pongo abelii	27.35	1.00e-19	90.10
IUUC-Pca-100314	Procavia capensis	27.88	2.00e-20	92.80
IUUC-Ppe-101663	Prunus persica	75.22	3.00e-131	460.00
IUUC-Pva-102947	Pteropus vampyrus	27.60	1.00e-19	90.10
IUUC-Pte-104027	Pyrenophora teres	38.03	4.00e-09	57.40
IUUC-Rno-105024	Rattus norvegicus	26.58	3.00e-16	78.60
IUUC-Smo-109194	Selaginella moellendorffii	65.90	3.00e-135	474.00
IUUC-Sit-109922	Setaria italica	69.10	3.00e-131	460.00
IUUC-Sly-111826	Solanum lycopersicum	70.67	5.00e-133	466.00
IUUC-Stu-112907	Solanum tuberosum	71.64	9.00e-133	465.00
IUUC-Sar-113522	Sorex araneus	27.12	3.00e-17	82.00
IUUC-Sbi-114536	Sorghum bicolor	67.93	9.00e-140	489.00
IUUC-Ssc-115445	Sus scrofa	27.51	2.00e-16	79.70
IUUC-Tgu-116551	Taeniopygia guttata	26.32	2.00e-15	76.30
IUUC-Tru-118407	Takifugu rubripes	25.65	2.00e-14	72.80
IUUC-Tsy-118794	Tarsius syrichta	26.91	3.00e-15	75.10
IUUC-Tni-120007	Tetraodon nigroviridis	48.65	6.40e-01	28.50
IUUC-Tca-121508	Theobroma cacao	76.61	2.00e-146	511.00
IUUC-Tae-125185	Triticum aestivum	66.28	2.00e-135	474.00
IUUC-Tur-126470	Triticum urartu	65.98	4.00e-135	473.00
IUUC-Tbe-127432	Tupaia belangeri	26.62	1.00e-16	79.70
IUUC-Ttr-128573	Tursiops truncatus	27.27	6.00e-18	84.30
IUUC-Vpa-130583	Vicugna pacos	26.47	6.00e-20	90.90
IUUC-Vvi-131710	Vitis vinifera	74.34	4.00e-141	493.00
IUUC-Xtr-132009	Xenopus tropicalis	27.07	5.00e-18	84.70
IUUC-Xma-134121	Xiphophorus maculatus	24.82	1.00e-14	73.60
IUUC-Zma-134998	Zea mays	68.51	6.00e-140	489.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence