iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078872

Ensembl Protein ID

OGLUM12G12440.1

UniProt Accession

A0A0E0BSC2; A0A0E0BSC2_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM12G12440	OGLUM12G12440.1	OGLUM12G12440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.70e-34	116.6	34	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lMrdPv++p+Gitydr+ Ie wl++g+  cPvt++pl++edlvPn+++rr+iq+wc +n+s
   Q: 34   IPAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHEDLVPNHAIRRVIQDWCVANRS 106
           89*******************************************************************9986 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MALLARRARK AVMAKAPAPL LQKRGGGAAA ELAIPAHFRC PISLDLMRDP VTAPTGITYD 60
REGIEAWLDT GRAVCPVTHA PLRHEDLVPN HAIRRVIQDW CVANRSRGVE RIPTPKIPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGC TGGCGCGGAG GGCGCGGAAG GCGGTGATGG CGAAGGCGCC GGCGCCGCTG 60
CTGCAGAAGA GGGGTGGCGG CGCGGCGGCG GAGCTGGCGA TCCCGGCGCA CTTCCGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	45.09	2.00e-97	348.00
IUUC-Aly-006049	Arabidopsis lyrata	37.66	4.00e-64	238.00
IUUC-Ath-007695	Arabidopsis thaliana	38.06	4.00e-63	234.00
IUUC-Bdi-014295	Brachypodium distachyon	75.00	3.00e-161	560.00
IUUC-Bol-015846	Brassica oleracea	39.95	4.00e-74	271.00
IUUC-Bra-017718	Brassica rapa	39.77	1.00e-75	276.00
IUUC-Lpe-050847	Leersia perrieri	78.48	0.00e+00	632.00
IUUC-Mtr-057926	Medicago truncatula	42.24	4.00e-84	304.00
IUUC-Mac-064511	Musa acuminata	48.37	3.00e-91	328.00
IUUC-Obr-076825	Oryza brachyantha	94.31	1.00e-125	441.00
IUUC-Ogl-076969	Oryza glaberrima	96.79	0.00e+00	711.00
IUUC-Oin-079622	Oryza indica	96.79	0.00e+00	711.00
IUUC-Olo-080664	Oryza longistaminata	97.23	9.00e-143	499.00
IUUC-Ome-081144	Oryza meridionalis	88.57	5.00e-151	527.00
IUUC-Oni-082871	Oryza nivara	96.79	0.00e+00	711.00
IUUC-Opu-084061	Oryza punctata	89.47	0.00e+00	672.00
IUUC-Oru-084561	Oryza rufipogon	96.56	0.00e+00	710.00
IUUC-Osa-086045	Oryza sativa	96.79	0.00e+00	711.00
IUUC-Olu-087884	Ostreococcus lucimarinus	61.19	2.00e-23	99.40
IUUC-Sit-109976	Setaria italica	79.95	2.00e-173	601.00
IUUC-Sly-110989	Solanum lycopersicum	41.28	1.00e-94	339.00
IUUC-Sbi-114180	Sorghum bicolor	78.57	6.00e-161	559.00
IUUC-Tca-120967	Theobroma cacao	47.56	4.00e-89	321.00
IUUC-Tae-122962	Triticum aestivum	77.03	9.00e-169	585.00
IUUC-Tur-126397	Triticum urartu	78.10	1.00e-85	308.00
IUUC-Vvi-131485	Vitis vinifera	48.87	8.00e-96	343.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence