iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006322

Ensembl Protein ID

fgenesh2_kg.2__945__AT1G67180.1

UniProt Accession

D7KV04; D7KV04_ARALL

Genbank Protein ID

EFH63367.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_475815

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__945__AT1G67180.1	fgenesh2_kg.2__945__AT1G67180.1	fgenesh2_kg.2__945__AT1G67180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-09	39.1	312	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+++f+    +lpCgH f+ +C+qkw ++  s++k+ +CPlC+
   Q: 312  CIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCK 357
           ********6633479******************************7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MENVVATVSG YHGSDRFKLI KLISHSGASY VGAMSRSITH LVCWKFEGKK YDLAKKFGTV 60
VVNHQWVEEC VREGRRVSET PYMFESGEEV GPLMVELPAV SGEAKVTKKV NKAAETFEKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAATG TGGTTGCAAC TGTGAGTGGT TATCATGGGT CTGATAGGTT CAAGCTCATC 60
AAGCTTATTT CTCATTCTGG AGCAAGTTAT GTTGGGGCAA TGTCAAGATC TATTACACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001357--BRCT_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12738--PTCB-BRCT
PF00097--zf-C3HC4

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_475815

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000133	Aegilops tauschii	52.15	3.00e-49	189.00
IUUC-Atr-003095	Amborella trichopoda	50.66	2.00e-42	166.00
IUUC-Apl-003562	Anas platyrhynchos	40.00	3.00e-10	57.80
IUUC-Ath-006604	Arabidopsis thaliana	89.68	0.00e+00	819.00
IUUC-Ang-009518	Aspergillus niger	32.22	5.00e-08	52.80
IUUC-Bdi-014816	Brachypodium distachyon	53.25	2.00e-48	186.00
IUUC-Bol-016032	Brassica oleracea	77.47	0.00e+00	724.00
IUUC-Bra-016767	Brassica rapa	77.09	0.00e+00	715.00
IUUC-Gma-043447	Glycine max	42.62	8.00e-88	317.00
IUUC-Lpe-050685	Leersia perrieri	40.97	2.00e-36	146.00
IUUC-Mtr-058640	Medicago truncatula	39.12	4.00e-87	314.00
IUUC-Mac-065152	Musa acuminata	37.15	2.00e-82	299.00
IUUC-Oba-075202	Oryza barthii	55.36	1.00e-53	203.00
IUUC-Obr-076294	Oryza brachyantha	53.94	5.00e-51	194.00
IUUC-Ogl-077543	Oryza glaberrima	55.36	1.00e-53	203.00
IUUC-Oin-079950	Oryza indica	55.36	8.00e-54	204.00
IUUC-Olo-080275	Oryza longistaminata	55.36	4.00e-54	205.00
IUUC-Ome-081398	Oryza meridionalis	54.76	2.00e-53	202.00
IUUC-Oru-084583	Oryza rufipogon	42.36	7.00e-38	150.00
IUUC-Osa-086181	Oryza sativa	55.56	2.00e-51	196.00
IUUC-Pop-099757	Populus trichocarpa	45.82	3.00e-111	394.00
IUUC-Ppe-101454	Prunus persica	41.67	2.00e-91	328.00
IUUC-Smo-109143	Selaginella moellendorffii	51.61	4.00e-28	118.00
IUUC-Sit-110027	Setaria italica	37.01	8.00e-84	303.00
IUUC-Sly-111644	Solanum lycopersicum	38.54	5.00e-93	334.00
IUUC-Stu-112802	Solanum tuberosum	39.19	6.00e-96	343.00
IUUC-Sbi-114227	Sorghum bicolor	52.63	3.00e-49	187.00
IUUC-Sre-115041	Sporisorium reilianum	28.87	6.00e-06	44.30
IUUC-Tca-121547	Theobroma cacao	36.94	2.00e-54	206.00
IUUC-Tae-123838	Triticum aestivum	52.41	5.00e-50	191.00
IUUC-Tur-126024	Triticum urartu	58.72	1.00e-30	127.00
IUUC-Uma-129563	Ustilago maydis	24.24	2.00e-06	46.60
IUUC-Vvi-131693	Vitis vinifera	43.18	2.00e-102	365.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence