iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014419

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100845906; BRADI_3g59936

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G59936	BRADI3G59936.1	BRADI3G59936.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-08	35.5	316	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg+ +  lpC+H+fh +C+ kw       + +++CPlC+
   Q: 316  CCICLSSYEDGVELsaLPCNHHFHSTCITKW------LRMHATCPLCK 357
           **********96654499*************......**********7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEPAADDSPP SPQQPLLGSP YAGAASGPGN HQASPPPAAR PSRLAALIGR AAGRRGPSML 60
VRETAALQLE RRRADWAHSR PVVALDVAWN VAFAAAAAAV LAASAAESPA KPLRLWLVGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCCG CCGCCGACGA CTCGCCGCCG TCGCCGCAGC AGCCGCTGCT GGGTTCTCCG 60
TACGCTGGCG CCGCCTCGGG GCCCGGGAAC CACCAGGCCT CGCCCCCGCC GGCGGCGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100845906

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006309	Arabidopsis lyrata	56.04	2.00e-88	318.00
IUUC-Ath-007135	Arabidopsis thaliana	57.89	1.00e-88	318.00
IUUC-Bol-015503	Brassica oleracea	57.14	3.00e-74	271.00
IUUC-Bra-017166	Brassica rapa	55.76	8.00e-79	286.00
IUUC-Gma-042852	Glycine max	60.38	1.00e-71	262.00
IUUC-Hvu-047330	Hordeum vulgare	90.26	4.00e-81	292.00
IUUC-Lpe-050934	Leersia perrieri	74.76	2.00e-115	408.00
IUUC-Mtr-058387	Medicago truncatula	56.06	6.00e-76	276.00
IUUC-Mdo-062909	Monodelphis domestica	53.06	6.00e-13	68.90
IUUC-Mac-064512	Musa acuminata	65.81	2.00e-100	357.00
IUUC-Oba-075784	Oryza barthii	76.06	3.00e-95	340.00
IUUC-Obr-076831	Oryza brachyantha	75.38	9.00e-94	335.00
IUUC-Ogu-077960	Oryza glumaepatula	68.37	1.00e-107	382.00
IUUC-Oin-079107	Oryza indica	67.39	2.00e-101	361.00
IUUC-Olo-080835	Oryza longistaminata	62.08	2.00e-83	301.00
IUUC-Ome-081564	Oryza meridionalis	78.57	7.00e-118	416.00
IUUC-Oni-082731	Oryza nivara	68.67	3.00e-108	384.00
IUUC-Opu-083749	Oryza punctata	76.95	1.00e-108	385.00
IUUC-Oru-084835	Oryza rufipogon	68.67	3.00e-108	384.00
IUUC-Osa-086089	Oryza sativa	87.10	4.00e-66	242.00
IUUC-Pop-098913	Populus trichocarpa	59.00	5.00e-87	313.00
IUUC-Ppe-101978	Prunus persica	60.24	2.00e-87	315.00
IUUC-Pgr-103437	Puccinia graminis	37.33	9.00e-09	55.10
IUUC-Sit-110199	Setaria italica	78.06	1.00e-110	392.00
IUUC-Sly-110887	Solanum lycopersicum	57.57	4.00e-84	303.00
IUUC-Sbi-114428	Sorghum bicolor	78.71	2.00e-106	378.00
IUUC-Tca-121328	Theobroma cacao	58.71	3.00e-71	261.00
IUUC-Tae-125157	Triticum aestivum	87.42	6.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence