iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112000

Ensembl Protein ID

PGSC0003DMT400072829

UniProt Accession

M1CR12; M1CR12_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028334	PGSC0003DMT400072829	PGSC0003DMT400072829

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-13	51.7	93	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H ds tc+++  + + ++++++D++i  WD r
   Q: 93   HDDSATCVEYsAEtCQIITAGWDKKINFWDAR 124
           99********944499**************66 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNTFSLNLAD PIRDAISRIR FAPHSNNLLI SSWDSSLRLY DVDSSKLRME APGEAELLDC 60
CFENERVCFS AASDGSVNRY DLDSGIKVSV GNHDDSATCV EYSAETCQII TAGWDKKINF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGGCAGTA ATTAGGCGGG AAATAGTTGA AGGTTTTGTG AAGATCTCTA ATGGCTTCGA 60
GCTTTCGTCT TCCCTAGCAC ATCTCTGCCG TCTTCAGAAC TCTGCGTTTA CTTCAAATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sot:102580074

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	43.84	7.00e-63	232.00
IUUC-Atr-002604	Amborella trichopoda	48.65	8.00e-87	312.00
IUUC-Aly-006482	Arabidopsis lyrata	45.81	3.00e-75	273.00
IUUC-Ath-007619	Arabidopsis thaliana	45.57	2.00e-76	278.00
IUUC-Bdi-014018	Brachypodium distachyon	44.16	2.00e-71	261.00
IUUC-Bol-016156	Brassica oleracea	46.79	3.00e-82	297.00
IUUC-Bra-017094	Brassica rapa	45.36	2.00e-76	278.00
IUUC-Gma-043687	Glycine max	56.07	2.00e-105	374.00
IUUC-Lpe-051057	Leersia perrieri	44.04	1.00e-67	248.00
IUUC-Mtr-058179	Medicago truncatula	55.45	8.00e-99	352.00
IUUC-Mac-064581	Musa acuminata	50.93	4.00e-91	326.00
IUUC-Oba-075790	Oryza barthii	42.81	2.00e-67	247.00
IUUC-Obr-076040	Oryza brachyantha	44.48	2.00e-70	258.00
IUUC-Ogu-079013	Oryza glumaepatula	38.48	8.00e-63	232.00
IUUC-Oin-080034	Oryza indica	42.96	1.00e-65	243.00
IUUC-Olo-080445	Oryza longistaminata	36.67	7.00e-51	193.00
IUUC-Ome-081933	Oryza meridionalis	39.09	2.00e-64	238.00
IUUC-Oni-082305	Oryza nivara	42.81	1.00e-67	248.00
IUUC-Oru-085161	Oryza rufipogon	42.81	1.00e-67	248.00
IUUC-Pop-099762	Populus trichocarpa	57.24	2.00e-100	357.00
IUUC-Ppe-101222	Prunus persica	58.09	5.00e-62	229.00
IUUC-Sit-110260	Setaria italica	45.99	2.00e-68	250.00
IUUC-Sly-111593	Solanum lycopersicum	76.62	3.00e-138	483.00
IUUC-Sbi-114097	Sorghum bicolor	44.26	3.00e-70	257.00
IUUC-Tca-121403	Theobroma cacao	60.73	3.00e-104	370.00
IUUC-Tae-125282	Triticum aestivum	44.93	8.00e-66	242.00
IUUC-Tur-126104	Triticum urartu	45.70	4.00e-67	246.00
IUUC-Vvi-131179	Vitis vinifera	59.62	9.00e-107	378.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence