iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1767__AT1G74990.1	fgenesh2_kg.2__1767__AT1G74990.1	fgenesh2_kg.2__1767__AT1G74990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.10e-07	30.1	15	72
E3 activity/RING/RING	1.10e-07	33.0	19	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnl 59
             f C I lel r+P v+ +G+ +   ++ kwl   s+ + cPv+++ ++e++lvP +
   Q: 15   NNFGCNICLELAREPIVTLCGHLFCWPCLYKWLhyHSQSNHCPVCKALVKEDSLVPLY 72
           5799*****************************88666668***************75 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++ p+v+ CgH+f+  Cl+kw +++   s++ +CP+C+
   Q: 19   CNICLELARE-PIVTLCGHLFCWPCLYKW-LHY--HSQSNHCPVCK 60
           99****9977.999***************.555..688889****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAISMTITNE EDASNNFGCN ICLELAREPI VTLCGHLFCW PCLYKWLHYH SQSNHCPVCK 60
ALVKEDSLVP LYGMGKPSSD PRSKLSCGVT VPNRPAATRI ETARPRLGER HHGSSFFGGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACCTCTC TCTCATCGCC GAGGTAAATC TTTCCTTCAA CGCTGGAAAA TTGAGTTTCC 60
CTTACCGTAG AAATCGAAAC TTTGTATTTC TCTGCATGTT TGATCAATTC TATAGGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_476637

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007415	Arabidopsis thaliana	91.30	6.00e-62	228.00
IUUC-Bol-016447	Brassica oleracea	74.44	8.00e-56	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence