iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007415

UUCD1 version

UUC-ArT-01190

Ensembl Protein ID

AT1G74990.1

UniProt Accession

Q9S7D6; Q9S7D6_ARATH

Genbank Protein ID

AAD55278.1; AAG51909.1; AAM67137.1; ABR46222.1; AEE35659.1

Protein Name

At1g74990; F25A4.5 protein; Putative RING zinc finger protein; Putative RING zinc finger protein; 43117-43530; RING/U-box superfamily protein

Genbank Nucleotide ID

AC008263; AC013258; AY088830; BT030642; CP002684

Gene Name

F9E10.16; At1g74990; F25A4.5; F25A4_5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G74990	AT1G74990.1	AT1G74990.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.80e-07	30.0	15	72
E3 activity/RING/RING	7.20e-08	33.7	19	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnl 59
             f C I lel r+P v+ +G+ +   ++ kwl   s+ + cPv+++ ++e++lvP +
   Q: 15   NNFGCNICLELAREPIVTLCGHLFCWPCLYKWLhyHSKSNHCPVCKALVKEDTLVPLY 72
           5799*****************************77444447***************75 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++ p+v+ CgH+f+  Cl+kw +++   sk+ +CP+C+
   Q: 19   CNICLELARE-PIVTLCGHLFCWPCLYKW-LHY--HSKSNHCPVCK 60
           99****9977.999***************.666..799999****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAINTITNEE DDASNNFGCN ICLELAREPI VTLCGHLFCW PCLYKWLHYH SKSNHCPVCK 60
ALVKEDTLVP LYGMGKPSSD PRSKLNSGVT VPNRPAATRT ETARPRLEQR HHGSSFFGGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACAGTATT CCTAGTTTCT TTCACCGACT CTTCTAATCT CTGCGATCGT ACATCAGAAA 60
CCTCTATCTC ATCGCCGAGG TAAATCTTTC AGACGCTGTC CCTTCTCGTA AAAATCGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G74990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006344	Arabidopsis lyrata	88.32	6.00e-62	228.00
IUUC-Bol-016447	Brassica oleracea	73.13	2.00e-53	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence