iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131311

UUCD1 version

UUC-ViV-00500

Ensembl Protein ID

VIT_18s0001g05220.t01

UniProt Accession

F6H0V9; F6H0V9_VITVI

Genbank Protein ID

CCB45556.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g05220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g05220	VIT_18s0001g05220.t01	VIT_18s0001g05220.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-06	26.5	320	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d ++l++G+ D t+++WD+r
   Q: 320  GHLDYSFASAWhPDgRTLATGNQDTTCRLWDIR 352
           799999999***99999**************87 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAEFQNPDLE YVVDDYYDMT DFEEDSFSET DPQRNSPFEA FDSDVEDNFE MNKPKTDTSA 60
LEARNGKDIQ GIPWERLNFT RDKYRETRLE QYKNYENLSR PREELEKDCK KIEKGSTFYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTAGTTCTA CACTCTTCTC TTCATTCTCT CCCTTCAGAC CTTCCAAATC TGTCTTTTAA 60
GTTTACACAT CTTCATTCCA CGTTCACAAG CCACCATTTT CTTTCATTCA GACTGAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

vvi:100267825

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	60.96	1.00e-158	551.00
IUUC-Atr-002734	Amborella trichopoda	74.67	0.00e+00	721.00
IUUC-Aly-005521	Arabidopsis lyrata	71.40	0.00e+00	664.00
IUUC-Ath-007611	Arabidopsis thaliana	71.18	0.00e+00	664.00
IUUC-Bol-015183	Brassica oleracea	70.29	0.00e+00	666.00
IUUC-Bra-017403	Brassica rapa	70.07	0.00e+00	664.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	28.79	9.00e-25	106.00
IUUC-Cme-027214	Cyanidioschyzon merolae	40.46	4.00e-55	209.00
IUUC-Dse-031456	Dothistroma septosporum	31.62	1.00e-42	166.00
IUUC-Gma-044288	Glycine max	78.87	0.00e+00	706.00
IUUC-Hvu-047809	Hordeum vulgare	62.56	1.00e-165	575.00
IUUC-Kpa-049267	Komagataella pastoris	27.48	3.00e-28	119.00
IUUC-Lpe-051582	Leersia perrieri	69.58	5.00e-172	596.00
IUUC-Mtr-058564	Medicago truncatula	78.30	0.00e+00	672.00
IUUC-Mac-065012	Musa acuminata	67.97	2.00e-170	592.00
IUUC-Obr-076093	Oryza brachyantha	69.06	1.00e-171	594.00
IUUC-Ogu-078133	Oryza glumaepatula	68.61	5.00e-171	592.00
IUUC-Oin-079185	Oryza indica	65.26	9.00e-166	575.00
IUUC-Olo-080502	Oryza longistaminata	57.08	5.00e-147	513.00
IUUC-Oni-082850	Oryza nivara	68.37	4.00e-170	590.00
IUUC-Osa-085692	Oryza sativa	58.12	1.00e-149	521.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	33.08	1.00e-51	196.00
IUUC-Spo-108140	Schizosaccharomyces pombe	29.22	4.00e-37	147.00
IUUC-Smo-109252	Selaginella moellendorffii	65.71	4.00e-169	586.00
IUUC-Sit-110668	Setaria italica	67.02	4.00e-161	559.00
IUUC-Sly-111186	Solanum lycopersicum	75.42	0.00e+00	686.00
IUUC-Stu-111950	Solanum tuberosum	74.06	0.00e+00	693.00
IUUC-Sbi-113990	Sorghum bicolor	65.63	5.00e-169	586.00
IUUC-Tca-121603	Theobroma cacao	69.02	0.00e+00	664.00
IUUC-Tae-123702	Triticum aestivum	62.61	7.00e-167	579.00
IUUC-Tur-126710	Triticum urartu	54.77	1.00e-147	515.00
IUUC-Yli-134594	Yarrowia lipolytica	30.94	2.00e-39	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence