iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126283

Ensembl Protein ID

TRIUR3_16961-P1

UniProt Accession

M8ATN9; M8ATN9_TRIUA

Genbank Protein ID

EMS68585.1

Protein Name

Coatomer subunit beta'-1

Genbank Nucleotide ID

KD004313

Gene Name

TRIUR3_16961

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_16961	TRIUR3_16961-T1	TRIUR3_16961-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-19	67.9	121	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           Htd ++c+a  ++ ++++s+sdD  ik+WD+++
   Q: 121  HTDYIRCVAVhPTlPYVLSSSDDMLIKLWDWDK 153
           ***********999****************976 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MPLRLEIKRK FAQRSERVKS VDLHPTEPWQ DPGEFVLGDS LHLGLPDAGK ALELFLSSVL 60
FLLYDVESLE TMVKSFEVSE LPVRSAKFVS RKQWVVAGAD DMFIRVYNYN TMDKIKVFEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTACGCG GATCTGAGCT CTTGCCCCCG CCCCTCCCGA ATCTGTCTCC AGTTCGTTTT 60
GCCTCAATTT TCGTGCTGCG CGCGCCGGGA TCTGACCAGT GCTGTTGCCC TCTGCTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	95.30	0.00e+00	1738.00
IUUC-Aml-002154	Ailuropoda melanoleuca	53.95	0.00e+00	941.00
IUUC-Atr-003090	Amborella trichopoda	69.48	0.00e+00	1282.00
IUUC-Apl-003976	Anas platyrhynchos	52.09	0.00e+00	941.00
IUUC-Aca-004301	Anolis carolinensis	54.01	0.00e+00	947.00
IUUC-Aly-006508	Arabidopsis lyrata	72.37	0.00e+00	1352.00
IUUC-Ath-007630	Arabidopsis thaliana	72.07	0.00e+00	1344.00
IUUC-Ago-007914	Ashbya gossypii	40.41	1.00e-165	576.00
IUUC-Acl-008237	Aspergillus clavatus	46.30	0.00e+00	763.00
IUUC-Afl-008535	Aspergillus flavus	48.67	0.00e+00	738.00
IUUC-Afu-008845	Aspergillus fumigatus	44.60	0.00e+00	748.00
IUUC-Ani-009135	Aspergillus nidulans	47.86	0.00e+00	743.00
IUUC-Ang-009654	Aspergillus niger	47.52	0.00e+00	674.00
IUUC-Aor-009939	Aspergillus oryzae	46.39	0.00e+00	771.00
IUUC-Ate-010355	Aspergillus terreus	46.43	0.00e+00	735.00
IUUC-Ame-010922	Astyanax mexicanus	49.84	0.00e+00	887.00
IUUC-Bgr-012249	Blumeria graminis	46.35	0.00e+00	743.00
IUUC-Bta-013579	Bos taurus	55.35	0.00e+00	820.00
IUUC-Bci-013866	Botrytis cinerea	46.46	0.00e+00	747.00
IUUC-Bdi-014102	Brachypodium distachyon	88.67	0.00e+00	1534.00
IUUC-Bol-015466	Brassica oleracea	75.11	0.00e+00	1301.00
IUUC-Bra-016617	Brassica rapa	74.89	0.00e+00	1296.00
IUUC-Cel-018387	Caenorhabditis elegans	48.01	0.00e+00	803.00
IUUC-Cja-019145	Callithrix jacchus	53.89	0.00e+00	943.00
IUUC-Cfa-020564	Canis familiaris	54.01	0.00e+00	944.00
IUUC-Cpo-022201	Cavia porcellus	53.95	0.00e+00	942.00
IUUC-Cho-024454	Choloepus hoffmanni	50.65	0.00e+00	768.00
IUUC-Cin-025681	Ciona intestinalis	52.50	0.00e+00	838.00
IUUC-Csv-026012	Ciona savignyi	52.50	0.00e+00	820.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	43.22	0.00e+00	653.00
IUUC-Cne-026986	Cryptococcus neoformans	43.24	0.00e+00	713.00
IUUC-Cme-027219	Cyanidioschyzon merolae	43.58	0.00e+00	762.00
IUUC-Dre-027846	Danio rerio	54.37	0.00e+00	941.00
IUUC-Dor-030462	Dipodomys ordii	51.39	0.00e+00	743.00
IUUC-Dse-031268	Dothistroma septosporum	45.50	0.00e+00	736.00
IUUC-Dme-031791	Drosophila melanogaster	50.06	0.00e+00	855.00
IUUC-Eca-034180	Equus caballus	52.50	0.00e+00	902.00
IUUC-Eeu-035086	Erinaceus europaeus	48.94	2.00e-119	422.00
IUUC-Fca-036265	Felis catus	52.73	0.00e+00	947.00
IUUC-Fal-037202	Ficedula albicollis	53.21	0.00e+00	911.00
IUUC-Fox-037711	Fusarium oxysporum	43.24	0.00e+00	651.00
IUUC-Fso-038268	Fusarium solani	42.58	0.00e+00	658.00
IUUC-Gmo-039046	Gadus morhua	54.25	0.00e+00	927.00
IUUC-Ggr-039863	Gaeumannomyces graminis	43.24	0.00e+00	679.00
IUUC-Gga-041112	Gallus gallus	51.51	0.00e+00	946.00
IUUC-Gac-041733	Gasterosteus aculeatus	53.31	0.00e+00	894.00
IUUC-Gma-044126	Glycine max	74.29	0.00e+00	1401.00
IUUC-Ggo-044984	Gorilla gorilla	53.89	0.00e+00	942.00
IUUC-Hsa-046698	Homo sapiens	54.01	0.00e+00	943.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	53.95	0.00e+00	941.00
IUUC-Kpa-049265	Komagataella pastoris	45.53	0.00e+00	710.00
IUUC-Lch-050473	Latimeria chalumnae	51.94	0.00e+00	949.00
IUUC-Lpe-051579	Leersia perrieri	73.76	0.00e+00	1356.00
IUUC-Loc-052675	Lepisosteus oculatus	53.71	0.00e+00	941.00
IUUC-Lma-053218	Leptosphaeria maculans	45.66	0.00e+00	717.00
IUUC-Laf-053757	Loxodonta africana	53.94	0.00e+00	937.00
IUUC-Mcc-054859	Macaca mulatta	53.89	0.00e+00	943.00
IUUC-Meu-056174	Macropus eugenii	51.33	2.00e-106	379.00
IUUC-Mor-057264	Magnaporthe oryzae	42.76	0.00e+00	662.00
IUUC-Mpo-057538	Magnaporthe poae	42.87	0.00e+00	679.00
IUUC-Mtr-058618	Medicago truncatula	62.46	0.00e+00	1109.00
IUUC-Mla-058937	Melampsora laricipopulina	43.62	0.00e+00	687.00
IUUC-Mga-059875	Meleagris gallopavo	51.51	0.00e+00	944.00
IUUC-Mvi-060240	Microbotryum violaceum	43.20	0.00e+00	751.00
IUUC-Mmr-061261	Microcebus murinus	54.01	0.00e+00	945.00
IUUC-Mdo-062076	Monodelphis domestica	52.52	0.00e+00	951.00
IUUC-Mmu-063324	Mus musculus	52.51	0.00e+00	947.00
IUUC-Mac-064636	Musa acuminata	63.88	0.00e+00	1147.00
IUUC-Mpu-065961	Mustela putorius furo	54.01	0.00e+00	943.00
IUUC-Mlu-067059	Myotis lucifugus	51.95	0.00e+00	931.00
IUUC-Nfi-068277	Neosartorya fischeri	46.31	0.00e+00	736.00
IUUC-Ncr-068659	Neurospora crassa	45.41	0.00e+00	741.00
IUUC-Nle-069034	Nomascus leucogenys	53.89	0.00e+00	943.00
IUUC-Opr-070334	Ochotona princeps	54.02	0.00e+00	839.00
IUUC-Ont-071563	Oreochromis niloticus	54.26	0.00e+00	935.00
IUUC-Oan-073416	Ornithorhynchus anatinus	56.27	0.00e+00	904.00
IUUC-Ocu-074522	Oryctolagus cuniculus	53.89	0.00e+00	940.00
IUUC-Oba-075760	Oryza barthii	82.48	0.00e+00	1491.00
IUUC-Obr-076201	Oryza brachyantha	74.26	0.00e+00	1373.00
IUUC-Ogl-077450	Oryza glaberrima	76.26	0.00e+00	1369.00
IUUC-Ogu-078994	Oryza glumaepatula	82.48	0.00e+00	1489.00
IUUC-Oin-079211	Oryza indica	81.65	0.00e+00	1480.00
IUUC-Olo-080731	Oryza longistaminata	86.03	0.00e+00	1472.00
IUUC-Ome-081762	Oryza meridionalis	80.56	0.00e+00	1381.00
IUUC-Oni-082324	Oryza nivara	82.48	0.00e+00	1490.00
IUUC-Opu-083433	Oryza punctata	86.27	0.00e+00	1469.00
IUUC-Oru-084829	Oryza rufipogon	82.48	0.00e+00	1491.00
IUUC-Osa-086026	Oryza sativa	76.41	0.00e+00	1382.00
IUUC-Ola-087245	Oryzias latipes	53.85	0.00e+00	930.00
IUUC-Olu-087655	Ostreococcus lucimarinus	49.42	0.00e+00	778.00
IUUC-Oga-088163	Otolemur garnettii	52.09	0.00e+00	890.00
IUUC-Oar-089842	Ovis aries	53.89	0.00e+00	943.00
IUUC-Ptr-090501	Pan troglodytes	53.89	0.00e+00	943.00
IUUC-Pan-092011	Papio anubis	53.89	0.00e+00	943.00
IUUC-Psi-093308	Pelodiscus sinensis	53.89	0.00e+00	941.00
IUUC-Pma-094695	Petromyzon marinus	52.72	0.00e+00	872.00
IUUC-Ppa-095911	Physcomitrella patens	57.27	0.00e+00	962.00
IUUC-Pfo-096587	Poecilia formosa	53.90	0.00e+00	933.00
IUUC-Pab-097926	Pongo abelii	52.05	0.00e+00	875.00
IUUC-Pop-099634	Populus trichocarpa	74.23	0.00e+00	1375.00
IUUC-Pca-100965	Procavia capensis	53.49	0.00e+00	910.00
IUUC-Ppe-101470	Prunus persica	74.11	0.00e+00	1407.00
IUUC-Pva-102451	Pteropus vampyrus	49.00	0.00e+00	687.00
IUUC-Pgr-103590	Puccinia graminis	43.45	0.00e+00	700.00
IUUC-Ptt-103868	Puccinia triticina	43.68	0.00e+00	700.00
IUUC-Pte-104274	Pyrenophora teres	45.96	0.00e+00	748.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	47.58	0.00e+00	727.00
IUUC-Rno-105979	Rattus norvegicus	45.89	0.00e+00	656.00
IUUC-Sce-106269	Saccharomyces cerevisiae	40.55	2.00e-173	602.00
IUUC-Sha-106905	Sarcophilus harrisii	53.02	0.00e+00	949.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	40.00	0.00e+00	630.00
IUUC-Spo-108299	Schizosaccharomyces pombe	39.39	0.00e+00	656.00
IUUC-Smo-108695	Selaginella moellendorffii	58.82	0.00e+00	987.00
IUUC-Sit-110239	Setaria italica	71.37	0.00e+00	1289.00
IUUC-Sly-111211	Solanum lycopersicum	60.40	0.00e+00	1063.00
IUUC-Stu-112906	Solanum tuberosum	61.59	0.00e+00	1017.00
IUUC-Sar-113472	Sorex araneus	49.84	0.00e+00	646.00
IUUC-Sbi-113801	Sorghum bicolor	73.33	0.00e+00	1371.00
IUUC-Sre-115040	Sporisorium reilianum	44.76	0.00e+00	733.00
IUUC-Ssc-115593	Sus scrofa	52.10	0.00e+00	943.00
IUUC-Tgu-117239	Taeniopygia guttata	52.32	0.00e+00	946.00
IUUC-Tru-118025	Takifugu rubripes	53.55	0.00e+00	925.00
IUUC-Tni-120142	Tetraodon nigroviridis	53.55	0.00e+00	921.00
IUUC-Tca-121613	Theobroma cacao	76.33	0.00e+00	1428.00
IUUC-Tre-122072	Trichoderma reesei	45.47	0.00e+00	733.00
IUUC-Tvi-122546	Trichoderma virens	45.35	0.00e+00	716.00
IUUC-Tae-125292	Triticum aestivum	77.41	0.00e+00	1354.00
IUUC-Tme-127041	Tuber melanosporum	46.46	0.00e+00	764.00
IUUC-Ttr-129294	Tursiops truncatus	53.77	0.00e+00	941.00
IUUC-Uma-129351	Ustilago maydis	43.22	0.00e+00	730.00
IUUC-Vda-129716	Verticillium dahliae	45.52	0.00e+00	749.00
IUUC-Vpa-130037	Vicugna pacos	49.05	2.00e-124	439.00
IUUC-Vvi-131689	Vitis vinifera	76.39	0.00e+00	1379.00
IUUC-Xtr-132633	Xenopus tropicalis	54.01	0.00e+00	941.00
IUUC-Xma-133347	Xiphophorus maculatus	54.14	0.00e+00	935.00
IUUC-Yli-134455	Yarrowia lipolytica	43.36	0.00e+00	656.00
IUUC-Zma-135789	Zea mays	74.95	0.00e+00	1384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence